Protein–RNA interactions for Protein: Q9JIA1

Lgi1, Leucine-rich glioma-inactivated protein 1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi1Q9JIA1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lgi1Q9JIA1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lgi1Q9JIA1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Gm44428-201ENSMUST00000204474 874 ntBASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lgi1Q9JIA1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lgi1Q9JIA1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lgi1Q9JIA1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lgi1Q9JIA1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.36■□□□□ 0.85
Lgi1Q9JIA1 Gm14523-201ENSMUST00000117260 558 ntBASIC20.36■□□□□ 0.85
Lgi1Q9JIA1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lgi1Q9JIA1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lgi1Q9JIA1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Gm7332-201ENSMUST00000118351 454 ntBASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Lgi1Q9JIA1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lgi1Q9JIA1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lgi1Q9JIA1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.34■□□□□ 0.85
Lgi1Q9JIA1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lgi1Q9JIA1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lgi1Q9JIA1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.33■□□□□ 0.85
Lgi1Q9JIA1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.33■□□□□ 0.85
Lgi1Q9JIA1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lgi1Q9JIA1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lgi1Q9JIA1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lgi1Q9JIA1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lgi1Q9JIA1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lgi1Q9JIA1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.32■□□□□ 0.84
Lgi1Q9JIA1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lgi1Q9JIA1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lgi1Q9JIA1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lgi1Q9JIA1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lgi1Q9JIA1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lgi1Q9JIA1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lgi1Q9JIA1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lgi1Q9JIA1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lgi1Q9JIA1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lgi1Q9JIA1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lgi1Q9JIA1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lgi1Q9JIA1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.29■□□□□ 0.84
Lgi1Q9JIA1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Lgi1Q9JIA1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lgi1Q9JIA1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lgi1Q9JIA1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lgi1Q9JIA1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.28■□□□□ 0.84
Lgi1Q9JIA1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lgi1Q9JIA1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lgi1Q9JIA1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Lgi1Q9JIA1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Lgi1Q9JIA1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.27■□□□□ 0.84
Lgi1Q9JIA1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lgi1Q9JIA1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lgi1Q9JIA1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lgi1Q9JIA1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lgi1Q9JIA1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lgi1Q9JIA1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lgi1Q9JIA1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lgi1Q9JIA1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lgi1Q9JIA1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lgi1Q9JIA1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.25■□□□□ 0.83
Lgi1Q9JIA1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.25■□□□□ 0.83
Lgi1Q9JIA1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lgi1Q9JIA1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lgi1Q9JIA1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lgi1Q9JIA1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lgi1Q9JIA1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Lgi1Q9JIA1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lgi1Q9JIA1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms