Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf13bQ9ET35 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf13bQ9ET35 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf13bQ9ET35 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf13bQ9ET35 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tnfrsf13bQ9ET35 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.27■□□□□ 0.35
Tnfrsf13bQ9ET35 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.26■□□□□ 0.35
Tnfrsf13bQ9ET35 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf13bQ9ET35 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Tnfrsf13bQ9ET35 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf13bQ9ET35 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf13bQ9ET35 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf13bQ9ET35 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf13bQ9ET35 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf13bQ9ET35 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf13bQ9ET35 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Tnfrsf13bQ9ET35 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tnfrsf13bQ9ET35 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tnfrsf13bQ9ET35 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf13bQ9ET35 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf13bQ9ET35 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Tnfrsf13bQ9ET35 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf13bQ9ET35 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf13bQ9ET35 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.23■□□□□ 0.35
Tnfrsf13bQ9ET35 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf13bQ9ET35 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Gm22567-201ENSMUST00000175542 342 ntBASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tnfrsf13bQ9ET35 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Tnfrsf13bQ9ET35 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.21■□□□□ 0.35
Tnfrsf13bQ9ET35 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.21■□□□□ 0.35
Tnfrsf13bQ9ET35 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.21■□□□□ 0.35
Tnfrsf13bQ9ET35 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf13bQ9ET35 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf13bQ9ET35 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfrsf13bQ9ET35 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfrsf13bQ9ET35 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Tnfrsf13bQ9ET35 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfrsf13bQ9ET35 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf13bQ9ET35 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf13bQ9ET35 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf13bQ9ET35 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf13bQ9ET35 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf13bQ9ET35 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.2■□□□□ 0.34
Tnfrsf13bQ9ET35 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf13bQ9ET35 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf13bQ9ET35 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf13bQ9ET35 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf13bQ9ET35 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf13bQ9ET35 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf13bQ9ET35 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf13bQ9ET35 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf13bQ9ET35 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf13bQ9ET35 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.18■□□□□ 0.34
Tnfrsf13bQ9ET35 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.18■□□□□ 0.34
Tnfrsf13bQ9ET35 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf13bQ9ET35 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Tnfrsf13bQ9ET35 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf13bQ9ET35 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf13bQ9ET35 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf13bQ9ET35 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf13bQ9ET35 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf13bQ9ET35 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf13bQ9ET35 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.16■□□□□ 0.34
Tnfrsf13bQ9ET35 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf13bQ9ET35 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf13bQ9ET35 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf13bQ9ET35 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf13bQ9ET35 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf13bQ9ET35 Gm9812-201ENSMUST00000061934 968 ntBASIC17.15■□□□□ 0.34
Tnfrsf13bQ9ET35 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf13bQ9ET35 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf13bQ9ET35 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf13bQ9ET35 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf13bQ9ET35 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf13bQ9ET35 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms