Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ube4bQ9ES00 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ube4bQ9ES00 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ube4bQ9ES00 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ube4bQ9ES00 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ube4bQ9ES00 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ube4bQ9ES00 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ube4bQ9ES00 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube4bQ9ES00 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube4bQ9ES00 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube4bQ9ES00 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ube4bQ9ES00 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4bQ9ES00 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4bQ9ES00 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4bQ9ES00 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4bQ9ES00 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4bQ9ES00 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4bQ9ES00 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4bQ9ES00 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.97■□□□□ 0.95
Ube4bQ9ES00 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ube4bQ9ES00 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4bQ9ES00 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4bQ9ES00 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4bQ9ES00 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4bQ9ES00 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4bQ9ES00 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4bQ9ES00 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4bQ9ES00 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4bQ9ES00 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4bQ9ES00 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ube4bQ9ES00 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4bQ9ES00 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4bQ9ES00 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Ube4bQ9ES00 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4bQ9ES00 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ube4bQ9ES00 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4bQ9ES00 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4bQ9ES00 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4bQ9ES00 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4bQ9ES00 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ube4bQ9ES00 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4bQ9ES00 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Ube4bQ9ES00 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube4bQ9ES00 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.91■□□□□ 0.94
Ube4bQ9ES00 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube4bQ9ES00 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.91■□□□□ 0.94
Ube4bQ9ES00 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4bQ9ES00 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.9■□□□□ 0.94
Ube4bQ9ES00 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4bQ9ES00 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4bQ9ES00 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ube4bQ9ES00 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4bQ9ES00 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ube4bQ9ES00 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.9■□□□□ 0.94
Ube4bQ9ES00 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4bQ9ES00 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.89■□□□□ 0.93
Ube4bQ9ES00 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.89■□□□□ 0.93
Ube4bQ9ES00 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube4bQ9ES00 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4bQ9ES00 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ube4bQ9ES00 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ube4bQ9ES00 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4bQ9ES00 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4bQ9ES00 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ube4bQ9ES00 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4bQ9ES00 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4bQ9ES00 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4bQ9ES00 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4bQ9ES00 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4bQ9ES00 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4bQ9ES00 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4bQ9ES00 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.83■□□□□ 0.93
Ube4bQ9ES00 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4bQ9ES00 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4bQ9ES00 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4bQ9ES00 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4bQ9ES00 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4bQ9ES00 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4bQ9ES00 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4bQ9ES00 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4bQ9ES00 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4bQ9ES00 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms