Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rtp4Q9ER80 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp4Q9ER80 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.55■□□□□ 0.88
Rtp4Q9ER80 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp4Q9ER80 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp4Q9ER80 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp4Q9ER80 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp4Q9ER80 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp4Q9ER80 Gm44428-201ENSMUST00000204474 874 ntBASIC20.53■□□□□ 0.88
Rtp4Q9ER80 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp4Q9ER80 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp4Q9ER80 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp4Q9ER80 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rtp4Q9ER80 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp4Q9ER80 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.51■□□□□ 0.87
Rtp4Q9ER80 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp4Q9ER80 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp4Q9ER80 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp4Q9ER80 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtp4Q9ER80 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rtp4Q9ER80 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtp4Q9ER80 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp4Q9ER80 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rtp4Q9ER80 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp4Q9ER80 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.48■□□□□ 0.87
Rtp4Q9ER80 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp4Q9ER80 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp4Q9ER80 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp4Q9ER80 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp4Q9ER80 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp4Q9ER80 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp4Q9ER80 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp4Q9ER80 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp4Q9ER80 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp4Q9ER80 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp4Q9ER80 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp4Q9ER80 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtp4Q9ER80 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rtp4Q9ER80 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.46■□□□□ 0.87
Rtp4Q9ER80 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp4Q9ER80 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.45■□□□□ 0.86
Rtp4Q9ER80 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.45■□□□□ 0.86
Rtp4Q9ER80 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp4Q9ER80 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp4Q9ER80 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rtp4Q9ER80 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp4Q9ER80 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp4Q9ER80 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp4Q9ER80 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.43■□□□□ 0.86
Rtp4Q9ER80 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rtp4Q9ER80 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rtp4Q9ER80 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rtp4Q9ER80 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtp4Q9ER80 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp4Q9ER80 Gm5921-201ENSMUST00000075898 882 ntBASIC20.41■□□□□ 0.86
Rtp4Q9ER80 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp4Q9ER80 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp4Q9ER80 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rtp4Q9ER80 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp4Q9ER80 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.4■□□□□ 0.86
Rtp4Q9ER80 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp4Q9ER80 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rtp4Q9ER80 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rtp4Q9ER80 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp4Q9ER80 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp4Q9ER80 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp4Q9ER80 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp4Q9ER80 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp4Q9ER80 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp4Q9ER80 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp4Q9ER80 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp4Q9ER80 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rtp4Q9ER80 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rtp4Q9ER80 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp4Q9ER80 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp4Q9ER80 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp4Q9ER80 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.37■□□□□ 0.85
Rtp4Q9ER80 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp4Q9ER80 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp4Q9ER80 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp4Q9ER80 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp4Q9ER80 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms