Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.63■■□□□ 1.05
Rrp8Q9DB85 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.63■■□□□ 1.05
Rrp8Q9DB85 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.63■■□□□ 1.05
Rrp8Q9DB85 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rrp8Q9DB85 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Rrp8Q9DB85 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rrp8Q9DB85 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.62■■□□□ 1.05
Rrp8Q9DB85 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.62■■□□□ 1.05
Rrp8Q9DB85 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rrp8Q9DB85 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rrp8Q9DB85 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.61■■□□□ 1.05
Rrp8Q9DB85 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rrp8Q9DB85 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rrp8Q9DB85 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rrp8Q9DB85 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rrp8Q9DB85 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.6■■□□□ 1.05
Rrp8Q9DB85 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rrp8Q9DB85 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rrp8Q9DB85 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rrp8Q9DB85 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rrp8Q9DB85 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rrp8Q9DB85 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rrp8Q9DB85 Gm7417-201ENSMUST00000192950 473 ntBASIC21.59■■□□□ 1.05
Rrp8Q9DB85 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Rrp8Q9DB85 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rrp8Q9DB85 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rrp8Q9DB85 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rrp8Q9DB85 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.58■■□□□ 1.05
Rrp8Q9DB85 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rrp8Q9DB85 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rrp8Q9DB85 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.57■■□□□ 1.04
Rrp8Q9DB85 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rrp8Q9DB85 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rrp8Q9DB85 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rrp8Q9DB85 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rrp8Q9DB85 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.56■■□□□ 1.04
Rrp8Q9DB85 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rrp8Q9DB85 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.56■■□□□ 1.04
Rrp8Q9DB85 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.56■■□□□ 1.04
Rrp8Q9DB85 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rrp8Q9DB85 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rrp8Q9DB85 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rrp8Q9DB85 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rrp8Q9DB85 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rrp8Q9DB85 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rrp8Q9DB85 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rrp8Q9DB85 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.54■■□□□ 1.04
Rrp8Q9DB85 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rrp8Q9DB85 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rrp8Q9DB85 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rrp8Q9DB85 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rrp8Q9DB85 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rrp8Q9DB85 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rrp8Q9DB85 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.53■■□□□ 1.04
Rrp8Q9DB85 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rrp8Q9DB85 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rrp8Q9DB85 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.52■■□□□ 1.04
Rrp8Q9DB85 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rrp8Q9DB85 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rrp8Q9DB85 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rrp8Q9DB85 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rrp8Q9DB85 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.51■■□□□ 1.03
Rrp8Q9DB85 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.51■■□□□ 1.03
Rrp8Q9DB85 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rrp8Q9DB85 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rrp8Q9DB85 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rrp8Q9DB85 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rrp8Q9DB85 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rrp8Q9DB85 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rrp8Q9DB85 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rrp8Q9DB85 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rrp8Q9DB85 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.49■■□□□ 1.03
Rrp8Q9DB85 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rrp8Q9DB85 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rrp8Q9DB85 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rrp8Q9DB85 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Rrp8Q9DB85 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.48■■□□□ 1.03
Rrp8Q9DB85 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Rrp8Q9DB85 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rrp8Q9DB85 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rrp8Q9DB85 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.47■■□□□ 1.03
Rrp8Q9DB85 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rrp8Q9DB85 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rrp8Q9DB85 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rrp8Q9DB85 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.47■■□□□ 1.03
Rrp8Q9DB85 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rrp8Q9DB85 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rrp8Q9DB85 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rrp8Q9DB85 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.46■■□□□ 1.03
Rrp8Q9DB85 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rrp8Q9DB85 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rrp8Q9DB85 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
Rrp8Q9DB85 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rrp8Q9DB85 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rrp8Q9DB85 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rrp8Q9DB85 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rrp8Q9DB85 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rrp8Q9DB85 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rrp8Q9DB85 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rrp8Q9DB85 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms