Protein–RNA interactions for Protein: Q9D8T7

Slirp, SRA stem-loop-interacting RNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SlirpQ9D8T7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SlirpQ9D8T7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SlirpQ9D8T7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SlirpQ9D8T7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SlirpQ9D8T7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SlirpQ9D8T7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SlirpQ9D8T7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SlirpQ9D8T7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SlirpQ9D8T7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SlirpQ9D8T7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SlirpQ9D8T7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
SlirpQ9D8T7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SlirpQ9D8T7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.41■□□□□ 0.7
SlirpQ9D8T7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SlirpQ9D8T7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SlirpQ9D8T7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.4■□□□□ 0.7
SlirpQ9D8T7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SlirpQ9D8T7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SlirpQ9D8T7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.4■□□□□ 0.7
SlirpQ9D8T7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SlirpQ9D8T7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SlirpQ9D8T7 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.39■□□□□ 0.7
SlirpQ9D8T7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SlirpQ9D8T7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SlirpQ9D8T7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SlirpQ9D8T7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SlirpQ9D8T7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SlirpQ9D8T7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SlirpQ9D8T7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SlirpQ9D8T7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SlirpQ9D8T7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SlirpQ9D8T7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SlirpQ9D8T7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SlirpQ9D8T7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SlirpQ9D8T7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SlirpQ9D8T7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SlirpQ9D8T7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SlirpQ9D8T7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SlirpQ9D8T7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SlirpQ9D8T7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SlirpQ9D8T7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SlirpQ9D8T7 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.35■□□□□ 0.69
SlirpQ9D8T7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SlirpQ9D8T7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SlirpQ9D8T7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SlirpQ9D8T7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SlirpQ9D8T7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.33■□□□□ 0.69
SlirpQ9D8T7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SlirpQ9D8T7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.33■□□□□ 0.69
SlirpQ9D8T7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SlirpQ9D8T7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SlirpQ9D8T7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SlirpQ9D8T7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SlirpQ9D8T7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SlirpQ9D8T7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SlirpQ9D8T7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SlirpQ9D8T7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SlirpQ9D8T7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SlirpQ9D8T7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SlirpQ9D8T7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SlirpQ9D8T7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SlirpQ9D8T7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SlirpQ9D8T7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SlirpQ9D8T7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SlirpQ9D8T7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SlirpQ9D8T7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.31■□□□□ 0.68
SlirpQ9D8T7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.3■□□□□ 0.68
SlirpQ9D8T7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.29■□□□□ 0.68
SlirpQ9D8T7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SlirpQ9D8T7 Gm5921-201ENSMUST00000075898 882 ntBASIC19.29■□□□□ 0.68
SlirpQ9D8T7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SlirpQ9D8T7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SlirpQ9D8T7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SlirpQ9D8T7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
SlirpQ9D8T7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SlirpQ9D8T7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SlirpQ9D8T7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SlirpQ9D8T7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SlirpQ9D8T7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms