Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.11■□□□□ 0.49
Lysmd2Q9D7V2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lysmd2Q9D7V2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd2Q9D7V2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd2Q9D7V2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd2Q9D7V2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd2Q9D7V2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd2Q9D7V2 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.1■□□□□ 0.49
Lysmd2Q9D7V2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd2Q9D7V2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Lysmd2Q9D7V2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd2Q9D7V2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd2Q9D7V2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd2Q9D7V2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd2Q9D7V2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Lysmd2Q9D7V2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd2Q9D7V2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
Lysmd2Q9D7V2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd2Q9D7V2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lysmd2Q9D7V2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lysmd2Q9D7V2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lysmd2Q9D7V2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lysmd2Q9D7V2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lysmd2Q9D7V2 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.08■□□□□ 0.48
Lysmd2Q9D7V2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lysmd2Q9D7V2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lysmd2Q9D7V2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lysmd2Q9D7V2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.07■□□□□ 0.48
Lysmd2Q9D7V2 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.07■□□□□ 0.48
Lysmd2Q9D7V2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.07■□□□□ 0.48
Lysmd2Q9D7V2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lysmd2Q9D7V2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd2Q9D7V2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.06■□□□□ 0.48
Lysmd2Q9D7V2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd2Q9D7V2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.06■□□□□ 0.48
Lysmd2Q9D7V2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Lysmd2Q9D7V2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd2Q9D7V2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.06■□□□□ 0.48
Lysmd2Q9D7V2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd2Q9D7V2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd2Q9D7V2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Lysmd2Q9D7V2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd2Q9D7V2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd2Q9D7V2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Lysmd2Q9D7V2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd2Q9D7V2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd2Q9D7V2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lysmd2Q9D7V2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lysmd2Q9D7V2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd2Q9D7V2 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.03■□□□□ 0.48
Lysmd2Q9D7V2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd2Q9D7V2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Lysmd2Q9D7V2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd2Q9D7V2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Lysmd2Q9D7V2 Gm45855-201ENSMUST00000212546 880 ntBASIC18.02■□□□□ 0.48
Lysmd2Q9D7V2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Lysmd2Q9D7V2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd2Q9D7V2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd2Q9D7V2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd2Q9D7V2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd2Q9D7V2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Lysmd2Q9D7V2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd2Q9D7V2 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd2Q9D7V2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18■□□□□ 0.47
Lysmd2Q9D7V2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd2Q9D7V2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lysmd2Q9D7V2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lysmd2Q9D7V2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd2Q9D7V2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lysmd2Q9D7V2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18■□□□□ 0.47
Lysmd2Q9D7V2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd2Q9D7V2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd2Q9D7V2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd2Q9D7V2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd2Q9D7V2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd2Q9D7V2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd2Q9D7V2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd2Q9D7V2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.99■□□□□ 0.47
Lysmd2Q9D7V2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd2Q9D7V2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms