Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem54Q9D7S1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem54Q9D7S1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem54Q9D7S1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem54Q9D7S1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.25■□□□□ 0.67
Tmem54Q9D7S1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem54Q9D7S1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem54Q9D7S1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem54Q9D7S1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem54Q9D7S1 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.23■□□□□ 0.67
Tmem54Q9D7S1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tmem54Q9D7S1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem54Q9D7S1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tmem54Q9D7S1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tmem54Q9D7S1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem54Q9D7S1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem54Q9D7S1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tmem54Q9D7S1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem54Q9D7S1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem54Q9D7S1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem54Q9D7S1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem54Q9D7S1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem54Q9D7S1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem54Q9D7S1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem54Q9D7S1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.21■□□□□ 0.67
Tmem54Q9D7S1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem54Q9D7S1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Tmem54Q9D7S1 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.19■□□□□ 0.66
Tmem54Q9D7S1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tmem54Q9D7S1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmem54Q9D7S1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tmem54Q9D7S1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Tmem54Q9D7S1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem54Q9D7S1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem54Q9D7S1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem54Q9D7S1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem54Q9D7S1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem54Q9D7S1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tmem54Q9D7S1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmem54Q9D7S1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tmem54Q9D7S1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmem54Q9D7S1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tmem54Q9D7S1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmem54Q9D7S1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tmem54Q9D7S1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem54Q9D7S1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tmem54Q9D7S1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmem54Q9D7S1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.15■□□□□ 0.66
Tmem54Q9D7S1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmem54Q9D7S1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmem54Q9D7S1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem54Q9D7S1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem54Q9D7S1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.14■□□□□ 0.65
Tmem54Q9D7S1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem54Q9D7S1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.13■□□□□ 0.65
Tmem54Q9D7S1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmem54Q9D7S1 Gm22567-201ENSMUST00000175542 342 ntBASIC19.13■□□□□ 0.65
Tmem54Q9D7S1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tmem54Q9D7S1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Tmem54Q9D7S1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tmem54Q9D7S1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tmem54Q9D7S1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tmem54Q9D7S1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tmem54Q9D7S1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tmem54Q9D7S1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tmem54Q9D7S1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Tmem54Q9D7S1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tmem54Q9D7S1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.11■□□□□ 0.65
Tmem54Q9D7S1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tmem54Q9D7S1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tmem54Q9D7S1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tmem54Q9D7S1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.11■□□□□ 0.65
Tmem54Q9D7S1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.11■□□□□ 0.65
Tmem54Q9D7S1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms