Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
5530400C23RikQ9D3I0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.47■■□□□ 1.03
5530400C23RikQ9D3I0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.47■■□□□ 1.03
5530400C23RikQ9D3I0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
5530400C23RikQ9D3I0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
5530400C23RikQ9D3I0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
5530400C23RikQ9D3I0 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.46■■□□□ 1.03
5530400C23RikQ9D3I0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
5530400C23RikQ9D3I0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
5530400C23RikQ9D3I0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
5530400C23RikQ9D3I0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
5530400C23RikQ9D3I0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
5530400C23RikQ9D3I0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
5530400C23RikQ9D3I0 Gm14523-201ENSMUST00000117260 558 ntBASIC21.45■■□□□ 1.02
5530400C23RikQ9D3I0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
5530400C23RikQ9D3I0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
5530400C23RikQ9D3I0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
5530400C23RikQ9D3I0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.44■■□□□ 1.02
5530400C23RikQ9D3I0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
5530400C23RikQ9D3I0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
5530400C23RikQ9D3I0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
5530400C23RikQ9D3I0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
5530400C23RikQ9D3I0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.43■■□□□ 1.02
5530400C23RikQ9D3I0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
5530400C23RikQ9D3I0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
5530400C23RikQ9D3I0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Gm7332-201ENSMUST00000118351 454 ntBASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Gm12366-201ENSMUST00000121722 873 ntBASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Gm5786-201ENSMUST00000085368 882 ntBASIC21.42■■□□□ 1.02
5530400C23RikQ9D3I0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
5530400C23RikQ9D3I0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.41■■□□□ 1.02
5530400C23RikQ9D3I0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
5530400C23RikQ9D3I0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
5530400C23RikQ9D3I0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
5530400C23RikQ9D3I0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
5530400C23RikQ9D3I0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
5530400C23RikQ9D3I0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
5530400C23RikQ9D3I0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.4■■□□□ 1.02
5530400C23RikQ9D3I0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
5530400C23RikQ9D3I0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
5530400C23RikQ9D3I0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
5530400C23RikQ9D3I0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
5530400C23RikQ9D3I0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
5530400C23RikQ9D3I0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
5530400C23RikQ9D3I0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.39■■□□□ 1.01
5530400C23RikQ9D3I0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
5530400C23RikQ9D3I0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
5530400C23RikQ9D3I0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.38■■□□□ 1.01
5530400C23RikQ9D3I0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
5530400C23RikQ9D3I0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
5530400C23RikQ9D3I0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
5530400C23RikQ9D3I0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
5530400C23RikQ9D3I0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
5530400C23RikQ9D3I0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
5530400C23RikQ9D3I0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
5530400C23RikQ9D3I0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
5530400C23RikQ9D3I0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.36■■□□□ 1.01
5530400C23RikQ9D3I0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
5530400C23RikQ9D3I0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
5530400C23RikQ9D3I0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
5530400C23RikQ9D3I0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
5530400C23RikQ9D3I0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
5530400C23RikQ9D3I0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
5530400C23RikQ9D3I0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.34■■□□□ 1.01
5530400C23RikQ9D3I0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
5530400C23RikQ9D3I0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
5530400C23RikQ9D3I0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
5530400C23RikQ9D3I0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
5530400C23RikQ9D3I0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
5530400C23RikQ9D3I0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.32■■□□□ 1
5530400C23RikQ9D3I0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 159.5 ms