Protein–RNA interactions for Protein: Q9D1C9

Rrp7a, Ribosomal RNA-processing protein 7 homolog A, mousemouse

Known RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp7aQ9D1C9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
Rrp7aQ9D1C9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rrp7aQ9D1C9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC32.62■■■□□ 2.81
Rrp7aQ9D1C9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
Rrp7aQ9D1C9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rrp7aQ9D1C9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rrp7aQ9D1C9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Rrp7aQ9D1C9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC32.61■■■□□ 2.81
Rrp7aQ9D1C9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Rrp7aQ9D1C9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rrp7aQ9D1C9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Rrp7aQ9D1C9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Rrp7aQ9D1C9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
Rrp7aQ9D1C9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC32.58■■■□□ 2.81
Rrp7aQ9D1C9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Rrp7aQ9D1C9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Rrp7aQ9D1C9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
Rrp7aQ9D1C9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Rrp7aQ9D1C9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Rrp7aQ9D1C9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC32.55■■■□□ 2.8
Rrp7aQ9D1C9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
Rrp7aQ9D1C9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rrp7aQ9D1C9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC32.54■■■□□ 2.8
Rrp7aQ9D1C9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
Rrp7aQ9D1C9 Gm7417-201ENSMUST00000192950 473 ntBASIC32.54■■■□□ 2.8
Rrp7aQ9D1C9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Rrp7aQ9D1C9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Rrp7aQ9D1C9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
Rrp7aQ9D1C9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC32.52■■■□□ 2.8
Rrp7aQ9D1C9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC32.52■■■□□ 2.8
Rrp7aQ9D1C9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Rrp7aQ9D1C9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Rrp7aQ9D1C9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Rrp7aQ9D1C9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
Rrp7aQ9D1C9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rrp7aQ9D1C9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rrp7aQ9D1C9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rrp7aQ9D1C9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Rrp7aQ9D1C9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rrp7aQ9D1C9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rrp7aQ9D1C9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC32.47■■■□□ 2.79
Rrp7aQ9D1C9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rrp7aQ9D1C9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rrp7aQ9D1C9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rrp7aQ9D1C9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rrp7aQ9D1C9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
Rrp7aQ9D1C9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rrp7aQ9D1C9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rrp7aQ9D1C9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC32.46■■■□□ 2.79
Rrp7aQ9D1C9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Rrp7aQ9D1C9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
Rrp7aQ9D1C9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rrp7aQ9D1C9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rrp7aQ9D1C9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rrp7aQ9D1C9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC32.45■■■□□ 2.79
Rrp7aQ9D1C9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rrp7aQ9D1C9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rrp7aQ9D1C9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Rrp7aQ9D1C9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
Rrp7aQ9D1C9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Rrp7aQ9D1C9 Gm28536-201ENSMUST00000190971 1317 ntBASIC32.44■■■□□ 2.78
Rrp7aQ9D1C9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rrp7aQ9D1C9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
Rrp7aQ9D1C9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rrp7aQ9D1C9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Rrp7aQ9D1C9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Rrp7aQ9D1C9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Rrp7aQ9D1C9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
Rrp7aQ9D1C9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC32.41■■■□□ 2.78
Rrp7aQ9D1C9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rrp7aQ9D1C9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC32.41■■■□□ 2.78
Rrp7aQ9D1C9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rrp7aQ9D1C9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC32.41■■■□□ 2.78
Rrp7aQ9D1C9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rrp7aQ9D1C9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rrp7aQ9D1C9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Rrp7aQ9D1C9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rrp7aQ9D1C9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rrp7aQ9D1C9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rrp7aQ9D1C9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC32.39■■■□□ 2.78
Rrp7aQ9D1C9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rrp7aQ9D1C9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC32.38■■■□□ 2.77
Rrp7aQ9D1C9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rrp7aQ9D1C9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rrp7aQ9D1C9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rrp7aQ9D1C9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Rrp7aQ9D1C9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rrp7aQ9D1C9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC32.36■■■□□ 2.77
Rrp7aQ9D1C9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC32.36■■■□□ 2.77
Rrp7aQ9D1C9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC32.35■■■□□ 2.77
Rrp7aQ9D1C9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms