Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.31■□□□□ 0.68
Raet1eQ9CZQ6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Raet1eQ9CZQ6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raet1eQ9CZQ6 Gm22567-201ENSMUST00000175542 342 ntBASIC19.31■□□□□ 0.68
Raet1eQ9CZQ6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raet1eQ9CZQ6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raet1eQ9CZQ6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raet1eQ9CZQ6 Notumos-201ENSMUST00000151998 2659 ntBASIC19.3■□□□□ 0.68
Raet1eQ9CZQ6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Raet1eQ9CZQ6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raet1eQ9CZQ6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raet1eQ9CZQ6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raet1eQ9CZQ6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raet1eQ9CZQ6 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.28■□□□□ 0.68
Raet1eQ9CZQ6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Raet1eQ9CZQ6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.28■□□□□ 0.68
Raet1eQ9CZQ6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raet1eQ9CZQ6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Raet1eQ9CZQ6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raet1eQ9CZQ6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1eQ9CZQ6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1eQ9CZQ6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1eQ9CZQ6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1eQ9CZQ6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1eQ9CZQ6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1eQ9CZQ6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1eQ9CZQ6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Raet1eQ9CZQ6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.26■□□□□ 0.67
Raet1eQ9CZQ6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raet1eQ9CZQ6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1eQ9CZQ6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1eQ9CZQ6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1eQ9CZQ6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1eQ9CZQ6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.24■□□□□ 0.67
Raet1eQ9CZQ6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Raet1eQ9CZQ6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.24■□□□□ 0.67
Raet1eQ9CZQ6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.24■□□□□ 0.67
Raet1eQ9CZQ6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1eQ9CZQ6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1eQ9CZQ6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1eQ9CZQ6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1eQ9CZQ6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1eQ9CZQ6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1eQ9CZQ6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1eQ9CZQ6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.23■□□□□ 0.67
Raet1eQ9CZQ6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1eQ9CZQ6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1eQ9CZQ6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Raet1eQ9CZQ6 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.22■□□□□ 0.67
Raet1eQ9CZQ6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1eQ9CZQ6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1eQ9CZQ6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1eQ9CZQ6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1eQ9CZQ6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.21■□□□□ 0.67
Raet1eQ9CZQ6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Raet1eQ9CZQ6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1eQ9CZQ6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Raet1eQ9CZQ6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1eQ9CZQ6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1eQ9CZQ6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1eQ9CZQ6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1eQ9CZQ6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1eQ9CZQ6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Raet1eQ9CZQ6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1eQ9CZQ6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Raet1eQ9CZQ6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1eQ9CZQ6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1eQ9CZQ6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1eQ9CZQ6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1eQ9CZQ6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1eQ9CZQ6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1eQ9CZQ6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1eQ9CZQ6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1eQ9CZQ6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Raet1eQ9CZQ6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Raet1eQ9CZQ6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1eQ9CZQ6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.18■□□□□ 0.66
Raet1eQ9CZQ6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1eQ9CZQ6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Raet1eQ9CZQ6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.17■□□□□ 0.66
Raet1eQ9CZQ6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1eQ9CZQ6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1eQ9CZQ6 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.17■□□□□ 0.66
Raet1eQ9CZQ6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1eQ9CZQ6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Raet1eQ9CZQ6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.15■□□□□ 0.66
Raet1eQ9CZQ6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raet1eQ9CZQ6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Raet1eQ9CZQ6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms