Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf135Q9CWS1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf135Q9CWS1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf135Q9CWS1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf135Q9CWS1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf135Q9CWS1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf135Q9CWS1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf135Q9CWS1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.79■■□□□ 1.24
Rnf135Q9CWS1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf135Q9CWS1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf135Q9CWS1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf135Q9CWS1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf135Q9CWS1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.78■■□□□ 1.24
Rnf135Q9CWS1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf135Q9CWS1 Gm11687-201ENSMUST00000118911 886 ntBASIC22.77■■□□□ 1.24
Rnf135Q9CWS1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Rnf135Q9CWS1 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.76■■□□□ 1.23
Rnf135Q9CWS1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf135Q9CWS1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf135Q9CWS1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rnf135Q9CWS1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Rnf135Q9CWS1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf135Q9CWS1 Gm9806-201ENSMUST00000051080 552 ntBASIC22.75■■□□□ 1.23
Rnf135Q9CWS1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf135Q9CWS1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf135Q9CWS1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf135Q9CWS1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf135Q9CWS1 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.73■■□□□ 1.23
Rnf135Q9CWS1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf135Q9CWS1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf135Q9CWS1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf135Q9CWS1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.72■■□□□ 1.23
Rnf135Q9CWS1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.72■■□□□ 1.23
Rnf135Q9CWS1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf135Q9CWS1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf135Q9CWS1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rnf135Q9CWS1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf135Q9CWS1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf135Q9CWS1 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.71■■□□□ 1.23
Rnf135Q9CWS1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf135Q9CWS1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf135Q9CWS1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.71■■□□□ 1.23
Rnf135Q9CWS1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Rnf135Q9CWS1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf135Q9CWS1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf135Q9CWS1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf135Q9CWS1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Gm16437-201ENSMUST00000025669 507 ntBASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf135Q9CWS1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Rnf135Q9CWS1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Gm12366-201ENSMUST00000121722 873 ntBASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Gm5786-201ENSMUST00000085368 882 ntBASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rnf135Q9CWS1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf135Q9CWS1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.65■■□□□ 1.22
Rnf135Q9CWS1 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.65■■□□□ 1.22
Rnf135Q9CWS1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf135Q9CWS1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf135Q9CWS1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf135Q9CWS1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf135Q9CWS1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rnf135Q9CWS1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rnf135Q9CWS1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.64■■□□□ 1.21
Rnf135Q9CWS1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.64■■□□□ 1.21
Rnf135Q9CWS1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf135Q9CWS1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Rnf135Q9CWS1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf135Q9CWS1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.63■■□□□ 1.21
Rnf135Q9CWS1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf135Q9CWS1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Rnf135Q9CWS1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf135Q9CWS1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf135Q9CWS1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf135Q9CWS1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf135Q9CWS1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.62■■□□□ 1.21
Rnf135Q9CWS1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf135Q9CWS1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.62■■□□□ 1.21
Rnf135Q9CWS1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf135Q9CWS1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms