Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cnot11Q9CWN7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.3■■□□□ 1
Cnot11Q9CWN7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.3■■□□□ 1
Cnot11Q9CWN7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnot11Q9CWN7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnot11Q9CWN7 Scarna2-201ENSMUST00000157560 414 ntBASIC21.29■■□□□ 1
Cnot11Q9CWN7 Gm9806-201ENSMUST00000051080 552 ntBASIC21.29■■□□□ 1
Cnot11Q9CWN7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.29■■□□□ 1
Cnot11Q9CWN7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cnot11Q9CWN7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnot11Q9CWN7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot11Q9CWN7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot11Q9CWN7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot11Q9CWN7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot11Q9CWN7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot11Q9CWN7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnot11Q9CWN7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnot11Q9CWN7 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.27■□□□□ 0.99
Cnot11Q9CWN7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cnot11Q9CWN7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot11Q9CWN7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.26■□□□□ 0.99
Cnot11Q9CWN7 Gm11687-201ENSMUST00000118911 886 ntBASIC21.26■□□□□ 0.99
Cnot11Q9CWN7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot11Q9CWN7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot11Q9CWN7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Cnot11Q9CWN7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot11Q9CWN7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cnot11Q9CWN7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot11Q9CWN7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cnot11Q9CWN7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cnot11Q9CWN7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cnot11Q9CWN7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot11Q9CWN7 Gm16437-201ENSMUST00000025669 507 ntBASIC21.22■□□□□ 0.99
Cnot11Q9CWN7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cnot11Q9CWN7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot11Q9CWN7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Cnot11Q9CWN7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot11Q9CWN7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot11Q9CWN7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cnot11Q9CWN7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.21■□□□□ 0.99
Cnot11Q9CWN7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot11Q9CWN7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.21■□□□□ 0.99
Cnot11Q9CWN7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot11Q9CWN7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot11Q9CWN7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cnot11Q9CWN7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot11Q9CWN7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
Cnot11Q9CWN7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot11Q9CWN7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cnot11Q9CWN7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cnot11Q9CWN7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot11Q9CWN7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot11Q9CWN7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot11Q9CWN7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot11Q9CWN7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot11Q9CWN7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot11Q9CWN7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot11Q9CWN7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cnot11Q9CWN7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cnot11Q9CWN7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cnot11Q9CWN7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cnot11Q9CWN7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cnot11Q9CWN7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot11Q9CWN7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cnot11Q9CWN7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot11Q9CWN7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Cnot11Q9CWN7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot11Q9CWN7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Cnot11Q9CWN7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot11Q9CWN7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot11Q9CWN7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Cnot11Q9CWN7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot11Q9CWN7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot11Q9CWN7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot11Q9CWN7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot11Q9CWN7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cnot11Q9CWN7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.15■□□□□ 0.98
Cnot11Q9CWN7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot11Q9CWN7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot11Q9CWN7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cnot11Q9CWN7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.14■□□□□ 0.98
Cnot11Q9CWN7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cnot11Q9CWN7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms