Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Otud1Q9CUB6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.79■□□□□ 0.92
Otud1Q9CUB6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Otud1Q9CUB6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Otud1Q9CUB6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Otud1Q9CUB6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Otud1Q9CUB6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Otud1Q9CUB6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Otud1Q9CUB6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Otud1Q9CUB6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Otud1Q9CUB6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Otud1Q9CUB6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Otud1Q9CUB6 Gm13238-201ENSMUST00000117655 780 ntBASIC20.76■□□□□ 0.91
Otud1Q9CUB6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Otud1Q9CUB6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.76■□□□□ 0.91
Otud1Q9CUB6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Otud1Q9CUB6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.76■□□□□ 0.91
Otud1Q9CUB6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Otud1Q9CUB6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Otud1Q9CUB6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Otud1Q9CUB6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.75■□□□□ 0.91
Otud1Q9CUB6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Otud1Q9CUB6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Otud1Q9CUB6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.74■□□□□ 0.91
Otud1Q9CUB6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Otud1Q9CUB6 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.74■□□□□ 0.91
Otud1Q9CUB6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Otud1Q9CUB6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Otud1Q9CUB6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Otud1Q9CUB6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Otud1Q9CUB6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Otud1Q9CUB6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Otud1Q9CUB6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Otud1Q9CUB6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Otud1Q9CUB6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Otud1Q9CUB6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Otud1Q9CUB6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Otud1Q9CUB6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Otud1Q9CUB6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Otud1Q9CUB6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.71■□□□□ 0.91
Otud1Q9CUB6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Otud1Q9CUB6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Otud1Q9CUB6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.71■□□□□ 0.91
Otud1Q9CUB6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Otud1Q9CUB6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Otud1Q9CUB6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Otud1Q9CUB6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Otud1Q9CUB6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Otud1Q9CUB6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.7■□□□□ 0.9
Otud1Q9CUB6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Otud1Q9CUB6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Otud1Q9CUB6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Otud1Q9CUB6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Otud1Q9CUB6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Otud1Q9CUB6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Otud1Q9CUB6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Otud1Q9CUB6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Otud1Q9CUB6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Otud1Q9CUB6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Otud1Q9CUB6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.69■□□□□ 0.9
Otud1Q9CUB6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.69■□□□□ 0.9
Otud1Q9CUB6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Otud1Q9CUB6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.69■□□□□ 0.9
Otud1Q9CUB6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Otud1Q9CUB6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Otud1Q9CUB6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.68■□□□□ 0.9
Otud1Q9CUB6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Otud1Q9CUB6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Otud1Q9CUB6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.67■□□□□ 0.9
Otud1Q9CUB6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Otud1Q9CUB6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Otud1Q9CUB6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms