Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rpl39lQ9CQD0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39lQ9CQD0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39lQ9CQD0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39lQ9CQD0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rpl39lQ9CQD0 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.32□□□□□ -0.12
Rpl39lQ9CQD0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Rpl39lQ9CQD0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39lQ9CQD0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39lQ9CQD0 Gm16148-201ENSMUST00000119653 893 ntBASIC14.31□□□□□ -0.12
Rpl39lQ9CQD0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39lQ9CQD0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Gm30023-201ENSMUST00000197970 889 ntBASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39lQ9CQD0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Notumos-201ENSMUST00000151998 2659 ntBASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39lQ9CQD0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl39lQ9CQD0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rpl39lQ9CQD0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl39lQ9CQD0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl39lQ9CQD0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl39lQ9CQD0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39lQ9CQD0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39lQ9CQD0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.27□□□□□ -0.12
Rpl39lQ9CQD0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39lQ9CQD0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39lQ9CQD0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rpl39lQ9CQD0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39lQ9CQD0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rpl39lQ9CQD0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.27□□□□□ -0.13
Rpl39lQ9CQD0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rpl39lQ9CQD0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpl39lQ9CQD0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rpl39lQ9CQD0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl39lQ9CQD0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl39lQ9CQD0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl39lQ9CQD0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpl39lQ9CQD0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpl39lQ9CQD0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl39lQ9CQD0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39lQ9CQD0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39lQ9CQD0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39lQ9CQD0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39lQ9CQD0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39lQ9CQD0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rpl39lQ9CQD0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.24□□□□□ -0.13
Rpl39lQ9CQD0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpl39lQ9CQD0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39lQ9CQD0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rpl39lQ9CQD0 Gm14121-201ENSMUST00000121441 1380 ntBASIC14.22□□□□□ -0.13
Rpl39lQ9CQD0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39lQ9CQD0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39lQ9CQD0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39lQ9CQD0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39lQ9CQD0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39lQ9CQD0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rpl39lQ9CQD0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpl39lQ9CQD0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39lQ9CQD0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.21□□□□□ -0.13
Rpl39lQ9CQD0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39lQ9CQD0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Rpl39lQ9CQD0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms