Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn4rQ99PI8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.33■□□□□ 0.68
Rtn4rQ99PI8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4rQ99PI8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rtn4rQ99PI8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rtn4rQ99PI8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rtn4rQ99PI8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rtn4rQ99PI8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rtn4rQ99PI8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rQ99PI8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rtn4rQ99PI8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rtn4rQ99PI8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rQ99PI8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtn4rQ99PI8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rQ99PI8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rQ99PI8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rQ99PI8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rQ99PI8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4rQ99PI8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.29■□□□□ 0.68
Rtn4rQ99PI8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4rQ99PI8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4rQ99PI8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rQ99PI8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rQ99PI8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rQ99PI8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rQ99PI8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rQ99PI8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rQ99PI8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rQ99PI8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.27■□□□□ 0.68
Rtn4rQ99PI8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rQ99PI8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Rtn4rQ99PI8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rQ99PI8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rQ99PI8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Rtn4rQ99PI8 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.27■□□□□ 0.67
Rtn4rQ99PI8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rtn4rQ99PI8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rQ99PI8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rQ99PI8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rQ99PI8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rQ99PI8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rQ99PI8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rQ99PI8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rQ99PI8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.24■□□□□ 0.67
Rtn4rQ99PI8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rQ99PI8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rtn4rQ99PI8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rQ99PI8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rQ99PI8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rQ99PI8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rQ99PI8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rQ99PI8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rQ99PI8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rtn4rQ99PI8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.22■□□□□ 0.67
Rtn4rQ99PI8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rQ99PI8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rQ99PI8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rQ99PI8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rQ99PI8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.21■□□□□ 0.67
Rtn4rQ99PI8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rQ99PI8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.2■□□□□ 0.66
Rtn4rQ99PI8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.2■□□□□ 0.66
Rtn4rQ99PI8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.2■□□□□ 0.66
Rtn4rQ99PI8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms