Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Nkx6-1Q99MA9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx6-1Q99MA9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx6-1Q99MA9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.75■□□□□ 0.91
Nkx6-1Q99MA9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.75■□□□□ 0.91
Nkx6-1Q99MA9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nkx6-1Q99MA9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx6-1Q99MA9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.75■□□□□ 0.91
Nkx6-1Q99MA9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.74■□□□□ 0.91
Nkx6-1Q99MA9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx6-1Q99MA9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-1Q99MA9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nkx6-1Q99MA9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-1Q99MA9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-1Q99MA9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-1Q99MA9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-1Q99MA9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.72■□□□□ 0.91
Nkx6-1Q99MA9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-1Q99MA9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-1Q99MA9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
Nkx6-1Q99MA9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-1Q99MA9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-1Q99MA9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-1Q99MA9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.7■□□□□ 0.9
Nkx6-1Q99MA9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.7■□□□□ 0.9
Nkx6-1Q99MA9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-1Q99MA9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-1Q99MA9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-1Q99MA9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Nkx6-1Q99MA9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-1Q99MA9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.69■□□□□ 0.9
Nkx6-1Q99MA9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.69■□□□□ 0.9
Nkx6-1Q99MA9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-1Q99MA9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-1Q99MA9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-1Q99MA9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-1Q99MA9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-1Q99MA9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nkx6-1Q99MA9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.67■□□□□ 0.9
Nkx6-1Q99MA9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx6-1Q99MA9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx6-1Q99MA9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-1Q99MA9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx6-1Q99MA9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-1Q99MA9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nkx6-1Q99MA9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-1Q99MA9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-1Q99MA9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-1Q99MA9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-1Q99MA9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx6-1Q99MA9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx6-1Q99MA9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.64■□□□□ 0.89
Nkx6-1Q99MA9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx6-1Q99MA9 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.63■□□□□ 0.89
Nkx6-1Q99MA9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx6-1Q99MA9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx6-1Q99MA9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx6-1Q99MA9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.62■□□□□ 0.89
Nkx6-1Q99MA9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx6-1Q99MA9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.62■□□□□ 0.89
Nkx6-1Q99MA9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx6-1Q99MA9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.61■□□□□ 0.89
Nkx6-1Q99MA9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.61■□□□□ 0.89
Nkx6-1Q99MA9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.61■□□□□ 0.89
Nkx6-1Q99MA9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-1Q99MA9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-1Q99MA9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Nkx6-1Q99MA9 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.6■□□□□ 0.89
Nkx6-1Q99MA9 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.6■□□□□ 0.89
Nkx6-1Q99MA9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nkx6-1Q99MA9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-1Q99MA9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-1Q99MA9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx6-1Q99MA9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx6-1Q99MA9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx6-1Q99MA9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.59■□□□□ 0.89
Nkx6-1Q99MA9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkx6-1Q99MA9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkx6-1Q99MA9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx6-1Q99MA9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.58■□□□□ 0.89
Nkx6-1Q99MA9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx6-1Q99MA9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx6-1Q99MA9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Nkx6-1Q99MA9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.57■□□□□ 0.88
Nkx6-1Q99MA9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx6-1Q99MA9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx6-1Q99MA9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx6-1Q99MA9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nkx6-1Q99MA9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx6-1Q99MA9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx6-1Q99MA9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms