Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp1aQ921W0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp1aQ921W0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp1aQ921W0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.26■□□□□ 0.67
Chmp1aQ921W0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chmp1aQ921W0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Chmp1aQ921W0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1aQ921W0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1aQ921W0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1aQ921W0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1aQ921W0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1aQ921W0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1aQ921W0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1aQ921W0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1aQ921W0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1aQ921W0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1aQ921W0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chmp1aQ921W0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1aQ921W0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1aQ921W0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1aQ921W0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1aQ921W0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1aQ921W0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1aQ921W0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1aQ921W0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1aQ921W0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chmp1aQ921W0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1aQ921W0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1aQ921W0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1aQ921W0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1aQ921W0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1aQ921W0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.2■□□□□ 0.66
Chmp1aQ921W0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp1aQ921W0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp1aQ921W0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp1aQ921W0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp1aQ921W0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp1aQ921W0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chmp1aQ921W0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp1aQ921W0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp1aQ921W0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp1aQ921W0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp1aQ921W0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp1aQ921W0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp1aQ921W0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp1aQ921W0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp1aQ921W0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp1aQ921W0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp1aQ921W0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp1aQ921W0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp1aQ921W0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp1aQ921W0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp1aQ921W0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp1aQ921W0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.16■□□□□ 0.66
Chmp1aQ921W0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.16■□□□□ 0.66
Chmp1aQ921W0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp1aQ921W0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.16■□□□□ 0.66
Chmp1aQ921W0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp1aQ921W0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.15■□□□□ 0.66
Chmp1aQ921W0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp1aQ921W0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp1aQ921W0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp1aQ921W0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp1aQ921W0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp1aQ921W0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.14■□□□□ 0.65
Chmp1aQ921W0 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.14■□□□□ 0.65
Chmp1aQ921W0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp1aQ921W0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp1aQ921W0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp1aQ921W0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp1aQ921W0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Chmp1aQ921W0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp1aQ921W0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Chmp1aQ921W0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp1aQ921W0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp1aQ921W0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp1aQ921W0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp1aQ921W0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Chmp1aQ921W0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp1aQ921W0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.11■□□□□ 0.65
Chmp1aQ921W0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp1aQ921W0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp1aQ921W0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp1aQ921W0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.11■□□□□ 0.65
Chmp1aQ921W0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.11■□□□□ 0.65
Chmp1aQ921W0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Chmp1aQ921W0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp1aQ921W0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Chmp1aQ921W0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp1aQ921W0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp1aQ921W0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms