Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga9Q91XX9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga9Q91XX9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga9Q91XX9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhga9Q91XX9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga9Q91XX9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga9Q91XX9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga9Q91XX9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga9Q91XX9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga9Q91XX9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdhga9Q91XX9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga9Q91XX9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga9Q91XX9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhga9Q91XX9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga9Q91XX9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.66■■□□□ 1.06
Pcdhga9Q91XX9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga9Q91XX9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga9Q91XX9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga9Q91XX9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhga9Q91XX9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga9Q91XX9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga9Q91XX9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga9Q91XX9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.65■■□□□ 1.06
Pcdhga9Q91XX9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.64■■□□□ 1.06
Pcdhga9Q91XX9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga9Q91XX9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga9Q91XX9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga9Q91XX9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga9Q91XX9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Pcdhga9Q91XX9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Pcdhga9Q91XX9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.63■■□□□ 1.05
Pcdhga9Q91XX9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga9Q91XX9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga9Q91XX9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga9Q91XX9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga9Q91XX9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga9Q91XX9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Pcdhga9Q91XX9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga9Q91XX9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhga9Q91XX9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga9Q91XX9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdhga9Q91XX9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga9Q91XX9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga9Q91XX9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga9Q91XX9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhga9Q91XX9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Pcdhga9Q91XX9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhga9Q91XX9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga9Q91XX9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga9Q91XX9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga9Q91XX9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga9Q91XX9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcdhga9Q91XX9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga9Q91XX9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhga9Q91XX9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhga9Q91XX9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga9Q91XX9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga9Q91XX9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.57■■□□□ 1.04
Pcdhga9Q91XX9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga9Q91XX9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga9Q91XX9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhga9Q91XX9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga9Q91XX9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga9Q91XX9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhga9Q91XX9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga9Q91XX9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga9Q91XX9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga9Q91XX9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga9Q91XX9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga9Q91XX9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhga9Q91XX9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhga9Q91XX9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga9Q91XX9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga9Q91XX9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhga9Q91XX9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.54■■□□□ 1.04
Pcdhga9Q91XX9 Gm5921-201ENSMUST00000075898 882 ntBASIC21.54■■□□□ 1.04
Pcdhga9Q91XX9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga9Q91XX9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga9Q91XX9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga9Q91XX9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhga9Q91XX9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga9Q91XX9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga9Q91XX9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga9Q91XX9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga9Q91XX9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga9Q91XX9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhga9Q91XX9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga9Q91XX9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga9Q91XX9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga9Q91XX9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga9Q91XX9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdhga9Q91XX9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms