Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgc3Q91XX1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgc3Q91XX1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhgc3Q91XX1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgc3Q91XX1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhgc3Q91XX1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.65■□□□□ 0.9
Pcdhgc3Q91XX1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhgc3Q91XX1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgc3Q91XX1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgc3Q91XX1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhgc3Q91XX1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhgc3Q91XX1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhgc3Q91XX1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Pcdhgc3Q91XX1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgc3Q91XX1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgc3Q91XX1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhgc3Q91XX1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgc3Q91XX1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgc3Q91XX1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgc3Q91XX1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhgc3Q91XX1 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.62■□□□□ 0.89
Pcdhgc3Q91XX1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhgc3Q91XX1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgc3Q91XX1 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.61■□□□□ 0.89
Pcdhgc3Q91XX1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgc3Q91XX1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgc3Q91XX1 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.6■□□□□ 0.89
Pcdhgc3Q91XX1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhgc3Q91XX1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhgc3Q91XX1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc3Q91XX1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc3Q91XX1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc3Q91XX1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc3Q91XX1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc3Q91XX1 Nkain2-201ENSMUST00000092602 558 ntBASIC20.59■□□□□ 0.89
Pcdhgc3Q91XX1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc3Q91XX1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc3Q91XX1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhgc3Q91XX1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgc3Q91XX1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgc3Q91XX1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgc3Q91XX1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc3Q91XX1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdhgc3Q91XX1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc3Q91XX1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc3Q91XX1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc3Q91XX1 Gm37136-201ENSMUST00000194368 194 ntBASIC20.57■□□□□ 0.88
Pcdhgc3Q91XX1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.57■□□□□ 0.88
Pcdhgc3Q91XX1 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.57■□□□□ 0.88
Pcdhgc3Q91XX1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Pcdhgc3Q91XX1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhgc3Q91XX1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc3Q91XX1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc3Q91XX1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc3Q91XX1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc3Q91XX1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc3Q91XX1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc3Q91XX1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.55■□□□□ 0.88
Pcdhgc3Q91XX1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc3Q91XX1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc3Q91XX1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc3Q91XX1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc3Q91XX1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc3Q91XX1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc3Q91XX1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc3Q91XX1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.53■□□□□ 0.88
Pcdhgc3Q91XX1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc3Q91XX1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc3Q91XX1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc3Q91XX1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhgc3Q91XX1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.52■□□□□ 0.88
Pcdhgc3Q91XX1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Pcdhgc3Q91XX1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc3Q91XX1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc3Q91XX1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhgc3Q91XX1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhgc3Q91XX1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgc3Q91XX1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgc3Q91XX1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgc3Q91XX1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhgc3Q91XX1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgc3Q91XX1 Gm6821-201ENSMUST00000107540 542 ntBASIC20.5■□□□□ 0.87
Pcdhgc3Q91XX1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms