Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
StrcQ8VIM6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
StrcQ8VIM6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
StrcQ8VIM6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
StrcQ8VIM6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
StrcQ8VIM6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
StrcQ8VIM6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.24■■□□□ 1.95
StrcQ8VIM6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
StrcQ8VIM6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
StrcQ8VIM6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
StrcQ8VIM6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC27.24■■□□□ 1.95
StrcQ8VIM6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
StrcQ8VIM6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.23■■□□□ 1.95
StrcQ8VIM6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
StrcQ8VIM6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
StrcQ8VIM6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
StrcQ8VIM6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.22■■□□□ 1.95
StrcQ8VIM6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
StrcQ8VIM6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC27.22■■□□□ 1.95
StrcQ8VIM6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC27.22■■□□□ 1.95
StrcQ8VIM6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC27.22■■□□□ 1.95
StrcQ8VIM6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
StrcQ8VIM6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC27.22■■□□□ 1.95
StrcQ8VIM6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
StrcQ8VIM6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
StrcQ8VIM6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
StrcQ8VIM6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
StrcQ8VIM6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC27.2■■□□□ 1.95
StrcQ8VIM6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC27.2■■□□□ 1.94
StrcQ8VIM6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
StrcQ8VIM6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
StrcQ8VIM6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
StrcQ8VIM6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
StrcQ8VIM6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
StrcQ8VIM6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
StrcQ8VIM6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
StrcQ8VIM6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
StrcQ8VIM6 Gm12922-201ENSMUST00000120626 809 ntBASIC27.19■■□□□ 1.94
StrcQ8VIM6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC27.19■■□□□ 1.94
StrcQ8VIM6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC27.19■■□□□ 1.94
StrcQ8VIM6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
StrcQ8VIM6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
StrcQ8VIM6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
StrcQ8VIM6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
StrcQ8VIM6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC27.17■■□□□ 1.94
StrcQ8VIM6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
StrcQ8VIM6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
StrcQ8VIM6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
StrcQ8VIM6 Gm27454-201ENSMUST00000185090 204 ntBASIC27.16■■□□□ 1.94
StrcQ8VIM6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
StrcQ8VIM6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
StrcQ8VIM6 Gm28536-201ENSMUST00000190971 1317 ntBASIC27.15■■□□□ 1.94
StrcQ8VIM6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
StrcQ8VIM6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
StrcQ8VIM6 Gm40881-201ENSMUST00000223397 166 ntBASIC27.15■■□□□ 1.94
StrcQ8VIM6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
StrcQ8VIM6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC27.15■■□□□ 1.94
StrcQ8VIM6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
StrcQ8VIM6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
StrcQ8VIM6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
StrcQ8VIM6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC27.14■■□□□ 1.94
StrcQ8VIM6 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.14■■□□□ 1.94
StrcQ8VIM6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
StrcQ8VIM6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
StrcQ8VIM6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC27.13■■□□□ 1.93
StrcQ8VIM6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC27.13■■□□□ 1.93
StrcQ8VIM6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC27.13■■□□□ 1.93
StrcQ8VIM6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
StrcQ8VIM6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
StrcQ8VIM6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
StrcQ8VIM6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
StrcQ8VIM6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
StrcQ8VIM6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
StrcQ8VIM6 Nsd1-206ENSMUST00000224918 1001 ntBASIC27.11■■□□□ 1.93
StrcQ8VIM6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
StrcQ8VIM6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
StrcQ8VIM6 Appbp2os-202ENSMUST00000206972 447 ntBASIC27.1■■□□□ 1.93
StrcQ8VIM6 Gm45417-201ENSMUST00000209533 758 ntBASIC27.09■■□□□ 1.93
StrcQ8VIM6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
StrcQ8VIM6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
StrcQ8VIM6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
StrcQ8VIM6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
StrcQ8VIM6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
StrcQ8VIM6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC27.07■■□□□ 1.92
StrcQ8VIM6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC27.06■■□□□ 1.92
StrcQ8VIM6 AC140930.3-201ENSMUST00000222935 274 ntBASIC27.06■■□□□ 1.92
StrcQ8VIM6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
StrcQ8VIM6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
StrcQ8VIM6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
StrcQ8VIM6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
StrcQ8VIM6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC27.06■■□□□ 1.92
StrcQ8VIM6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC27.05■■□□□ 1.92
StrcQ8VIM6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
StrcQ8VIM6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
StrcQ8VIM6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
StrcQ8VIM6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
StrcQ8VIM6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
StrcQ8VIM6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
StrcQ8VIM6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
StrcQ8VIM6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms