Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdhr1Q8VHP6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdhr1Q8VHP6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdhr1Q8VHP6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdhr1Q8VHP6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.45■■□□□ 1.02
Cdhr1Q8VHP6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Cdhr1Q8VHP6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.44■■□□□ 1.02
Cdhr1Q8VHP6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdhr1Q8VHP6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cdhr1Q8VHP6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdhr1Q8VHP6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdhr1Q8VHP6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdhr1Q8VHP6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cdhr1Q8VHP6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cdhr1Q8VHP6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cdhr1Q8VHP6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdhr1Q8VHP6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdhr1Q8VHP6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdhr1Q8VHP6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdhr1Q8VHP6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr1Q8VHP6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cdhr1Q8VHP6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cdhr1Q8VHP6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdhr1Q8VHP6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdhr1Q8VHP6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cdhr1Q8VHP6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.4■■□□□ 1.02
Cdhr1Q8VHP6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdhr1Q8VHP6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdhr1Q8VHP6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdhr1Q8VHP6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdhr1Q8VHP6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.39■■□□□ 1.01
Cdhr1Q8VHP6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Cdhr1Q8VHP6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdhr1Q8VHP6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Cdhr1Q8VHP6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdhr1Q8VHP6 Rps24-207ENSMUST00000224568 714 ntBASIC21.38■■□□□ 1.01
Cdhr1Q8VHP6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdhr1Q8VHP6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cdhr1Q8VHP6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr1Q8VHP6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.37■■□□□ 1.01
Cdhr1Q8VHP6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr1Q8VHP6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr1Q8VHP6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr1Q8VHP6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr1Q8VHP6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdhr1Q8VHP6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdhr1Q8VHP6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdhr1Q8VHP6 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.35■■□□□ 1.01
Cdhr1Q8VHP6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cdhr1Q8VHP6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.35■■□□□ 1.01
Cdhr1Q8VHP6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdhr1Q8VHP6 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdhr1Q8VHP6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.33■■□□□ 1.01
Cdhr1Q8VHP6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdhr1Q8VHP6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdhr1Q8VHP6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdhr1Q8VHP6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.33■■□□□ 1.01
Cdhr1Q8VHP6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdhr1Q8VHP6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdhr1Q8VHP6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdhr1Q8VHP6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Cdhr1Q8VHP6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.32■■□□□ 1
Cdhr1Q8VHP6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdhr1Q8VHP6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdhr1Q8VHP6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdhr1Q8VHP6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr1Q8VHP6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdhr1Q8VHP6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdhr1Q8VHP6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.3■■□□□ 1
Cdhr1Q8VHP6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdhr1Q8VHP6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.29■■□□□ 1
Cdhr1Q8VHP6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms