Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps39Q8R5L3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Vps39Q8R5L3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps39Q8R5L3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Vps39Q8R5L3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps39Q8R5L3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vps39Q8R5L3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.87■■□□□ 1.09
Vps39Q8R5L3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps39Q8R5L3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps39Q8R5L3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Vps39Q8R5L3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps39Q8R5L3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vps39Q8R5L3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Vps39Q8R5L3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps39Q8R5L3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Vps39Q8R5L3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.86■■□□□ 1.09
Vps39Q8R5L3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps39Q8R5L3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps39Q8R5L3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps39Q8R5L3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps39Q8R5L3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Vps39Q8R5L3 Gm22567-201ENSMUST00000175542 342 ntBASIC21.83■■□□□ 1.09
Vps39Q8R5L3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps39Q8R5L3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vps39Q8R5L3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps39Q8R5L3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps39Q8R5L3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.83■■□□□ 1.08
Vps39Q8R5L3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps39Q8R5L3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.82■■□□□ 1.08
Vps39Q8R5L3 Gm44428-201ENSMUST00000204474 874 ntBASIC21.82■■□□□ 1.08
Vps39Q8R5L3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.82■■□□□ 1.08
Vps39Q8R5L3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Vps39Q8R5L3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps39Q8R5L3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.81■■□□□ 1.08
Vps39Q8R5L3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Vps39Q8R5L3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Vps39Q8R5L3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Vps39Q8R5L3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps39Q8R5L3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps39Q8R5L3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps39Q8R5L3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps39Q8R5L3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Vps39Q8R5L3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps39Q8R5L3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps39Q8R5L3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.79■■□□□ 1.08
Vps39Q8R5L3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps39Q8R5L3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps39Q8R5L3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps39Q8R5L3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Vps39Q8R5L3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vps39Q8R5L3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Vps39Q8R5L3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Vps39Q8R5L3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps39Q8R5L3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps39Q8R5L3 Gm9806-201ENSMUST00000051080 552 ntBASIC21.77■■□□□ 1.08
Vps39Q8R5L3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps39Q8R5L3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vps39Q8R5L3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps39Q8R5L3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Vps39Q8R5L3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps39Q8R5L3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps39Q8R5L3 Scarna2-201ENSMUST00000157560 414 ntBASIC21.76■■□□□ 1.07
Vps39Q8R5L3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps39Q8R5L3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps39Q8R5L3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms