Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Abca3Q8R420 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC28.29■■■□□ 2.12
Abca3Q8R420 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca3Q8R420 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca3Q8R420 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC28.28■■■□□ 2.12
Abca3Q8R420 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca3Q8R420 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca3Q8R420 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca3Q8R420 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Abca3Q8R420 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Abca3Q8R420 Gm22238-201ENSMUST00000175222 88 ntBASIC28.27■■■□□ 2.12
Abca3Q8R420 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca3Q8R420 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Abca3Q8R420 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Abca3Q8R420 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca3Q8R420 AC164433.2-201ENSMUST00000226346 1701 ntBASIC28.25■■■□□ 2.11
Abca3Q8R420 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca3Q8R420 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca3Q8R420 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Abca3Q8R420 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC28.23■■■□□ 2.11
Abca3Q8R420 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca3Q8R420 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Abca3Q8R420 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Abca3Q8R420 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Abca3Q8R420 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca3Q8R420 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca3Q8R420 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Abca3Q8R420 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.22■■■□□ 2.11
Abca3Q8R420 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC28.22■■■□□ 2.11
Abca3Q8R420 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca3Q8R420 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Abca3Q8R420 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca3Q8R420 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
Abca3Q8R420 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Abca3Q8R420 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca3Q8R420 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Abca3Q8R420 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca3Q8R420 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Abca3Q8R420 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC28.21■■■□□ 2.11
Abca3Q8R420 Serp2-204ENSMUST00000228055 705 ntBASIC28.21■■■□□ 2.11
Abca3Q8R420 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Abca3Q8R420 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Abca3Q8R420 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Abca3Q8R420 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca3Q8R420 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca3Q8R420 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca3Q8R420 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Abca3Q8R420 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Abca3Q8R420 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC28.18■■■□□ 2.1
Abca3Q8R420 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC28.18■■■□□ 2.1
Abca3Q8R420 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC28.18■■■□□ 2.1
Abca3Q8R420 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Abca3Q8R420 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Abca3Q8R420 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Abca3Q8R420 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Abca3Q8R420 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca3Q8R420 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Abca3Q8R420 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca3Q8R420 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Abca3Q8R420 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Abca3Q8R420 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
Abca3Q8R420 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Abca3Q8R420 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Abca3Q8R420 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Abca3Q8R420 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
Abca3Q8R420 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC28.15■■■□□ 2.1
Abca3Q8R420 Gm7417-201ENSMUST00000192950 473 ntBASIC28.15■■■□□ 2.1
Abca3Q8R420 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
Abca3Q8R420 Nsd1-206ENSMUST00000224918 1001 ntBASIC28.14■■■□□ 2.1
Abca3Q8R420 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Abca3Q8R420 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Abca3Q8R420 Gm43034-201ENSMUST00000198678 1364 ntBASIC28.13■■■□□ 2.09
Abca3Q8R420 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC28.13■■■□□ 2.09
Abca3Q8R420 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Abca3Q8R420 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Abca3Q8R420 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Abca3Q8R420 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC28.12■■■□□ 2.09
Abca3Q8R420 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Abca3Q8R420 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Abca3Q8R420 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC28.12■■■□□ 2.09
Abca3Q8R420 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Abca3Q8R420 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Abca3Q8R420 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca3Q8R420 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Abca3Q8R420 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC28.11■■■□□ 2.09
Abca3Q8R420 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca3Q8R420 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca3Q8R420 Gm9847-201ENSMUST00000052528 599 ntBASIC28.1■■■□□ 2.09
Abca3Q8R420 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Abca3Q8R420 Gm40881-201ENSMUST00000223397 166 ntBASIC28.09■■■□□ 2.09
Abca3Q8R420 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Abca3Q8R420 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Abca3Q8R420 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Abca3Q8R420 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca3Q8R420 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Abca3Q8R420 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Abca3Q8R420 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca3Q8R420 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca3Q8R420 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca3Q8R420 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms