Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Zcchc9Q8R1J3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Zcchc9Q8R1J3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Zcchc9Q8R1J3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Zcchc9Q8R1J3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Zcchc9Q8R1J3 Gm14117-201ENSMUST00000122417 843 ntBASIC21.82■■□□□ 1.08
Zcchc9Q8R1J3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Zcchc9Q8R1J3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Zcchc9Q8R1J3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Zcchc9Q8R1J3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zcchc9Q8R1J3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Zcchc9Q8R1J3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zcchc9Q8R1J3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zcchc9Q8R1J3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zcchc9Q8R1J3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Zcchc9Q8R1J3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.8■■□□□ 1.08
Zcchc9Q8R1J3 Gm45102-201ENSMUST00000207427 857 ntBASIC21.8■■□□□ 1.08
Zcchc9Q8R1J3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Zcchc9Q8R1J3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zcchc9Q8R1J3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zcchc9Q8R1J3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zcchc9Q8R1J3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Zcchc9Q8R1J3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Zcchc9Q8R1J3 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.79■■□□□ 1.08
Zcchc9Q8R1J3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Zcchc9Q8R1J3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.79■■□□□ 1.08
Zcchc9Q8R1J3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Zcchc9Q8R1J3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zcchc9Q8R1J3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zcchc9Q8R1J3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zcchc9Q8R1J3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zcchc9Q8R1J3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zcchc9Q8R1J3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zcchc9Q8R1J3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Zcchc9Q8R1J3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Zcchc9Q8R1J3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.77■■□□□ 1.08
Zcchc9Q8R1J3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Zcchc9Q8R1J3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zcchc9Q8R1J3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zcchc9Q8R1J3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Zcchc9Q8R1J3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Zcchc9Q8R1J3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Zcchc9Q8R1J3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Zcchc9Q8R1J3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zcchc9Q8R1J3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zcchc9Q8R1J3 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.74■■□□□ 1.07
Zcchc9Q8R1J3 Gm9959-201ENSMUST00000068277 390 ntBASIC21.74■■□□□ 1.07
Zcchc9Q8R1J3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zcchc9Q8R1J3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.74■■□□□ 1.07
Zcchc9Q8R1J3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zcchc9Q8R1J3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.73■■□□□ 1.07
Zcchc9Q8R1J3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zcchc9Q8R1J3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.72■■□□□ 1.07
Zcchc9Q8R1J3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Zcchc9Q8R1J3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Zcchc9Q8R1J3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zcchc9Q8R1J3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Zcchc9Q8R1J3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zcchc9Q8R1J3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Zcchc9Q8R1J3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Zcchc9Q8R1J3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zcchc9Q8R1J3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zcchc9Q8R1J3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Zcchc9Q8R1J3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zcchc9Q8R1J3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zcchc9Q8R1J3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.69■■□□□ 1.06
Zcchc9Q8R1J3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.69■■□□□ 1.06
Zcchc9Q8R1J3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zcchc9Q8R1J3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zcchc9Q8R1J3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.68■■□□□ 1.06
Zcchc9Q8R1J3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Zcchc9Q8R1J3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.68■■□□□ 1.06
Zcchc9Q8R1J3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Zcchc9Q8R1J3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zcchc9Q8R1J3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zcchc9Q8R1J3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms