Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Alms1Q8K4E0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Alms1Q8K4E0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
Alms1Q8K4E0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Alms1Q8K4E0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Alms1Q8K4E0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Alms1Q8K4E0 Gm10232-201ENSMUST00000089221 720 ntBASIC21.72■■□□□ 1.07
Alms1Q8K4E0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Alms1Q8K4E0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.7■■□□□ 1.06
Alms1Q8K4E0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Alms1Q8K4E0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Alms1Q8K4E0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Alms1Q8K4E0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Alms1Q8K4E0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Alms1Q8K4E0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Alms1Q8K4E0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Alms1Q8K4E0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Alms1Q8K4E0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Alms1Q8K4E0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Alms1Q8K4E0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.67■■□□□ 1.06
Alms1Q8K4E0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alms1Q8K4E0 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.65■■□□□ 1.06
Alms1Q8K4E0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Alms1Q8K4E0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.65■■□□□ 1.06
Alms1Q8K4E0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.65■■□□□ 1.06
Alms1Q8K4E0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Alms1Q8K4E0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Alms1Q8K4E0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Alms1Q8K4E0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Alms1Q8K4E0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.64■■□□□ 1.05
Alms1Q8K4E0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alms1Q8K4E0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Alms1Q8K4E0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alms1Q8K4E0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alms1Q8K4E0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alms1Q8K4E0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alms1Q8K4E0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Alms1Q8K4E0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Alms1Q8K4E0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alms1Q8K4E0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Alms1Q8K4E0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alms1Q8K4E0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Alms1Q8K4E0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Alms1Q8K4E0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Alms1Q8K4E0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.61■■□□□ 1.05
Alms1Q8K4E0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Alms1Q8K4E0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Alms1Q8K4E0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Alms1Q8K4E0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Alms1Q8K4E0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Alms1Q8K4E0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Alms1Q8K4E0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alms1Q8K4E0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Alms1Q8K4E0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alms1Q8K4E0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Alms1Q8K4E0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Alms1Q8K4E0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Alms1Q8K4E0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.56■■□□□ 1.04
Alms1Q8K4E0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.56■■□□□ 1.04
Alms1Q8K4E0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Alms1Q8K4E0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alms1Q8K4E0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Alms1Q8K4E0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms