Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn1Q8K445 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn1Q8K445 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.63■□□□□ 0.89
Clrn1Q8K445 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.62■□□□□ 0.89
Clrn1Q8K445 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn1Q8K445 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn1Q8K445 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn1Q8K445 Gm14523-201ENSMUST00000117260 558 ntBASIC20.61■□□□□ 0.89
Clrn1Q8K445 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn1Q8K445 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn1Q8K445 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn1Q8K445 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.6■□□□□ 0.89
Clrn1Q8K445 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn1Q8K445 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn1Q8K445 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn1Q8K445 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn1Q8K445 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.59■□□□□ 0.89
Clrn1Q8K445 Gm7332-201ENSMUST00000118351 454 ntBASIC20.59■□□□□ 0.89
Clrn1Q8K445 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.59■□□□□ 0.89
Clrn1Q8K445 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clrn1Q8K445 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Clrn1Q8K445 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn1Q8K445 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.58■□□□□ 0.89
Clrn1Q8K445 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn1Q8K445 Gm12366-201ENSMUST00000121722 873 ntBASIC20.58■□□□□ 0.89
Clrn1Q8K445 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.58■□□□□ 0.89
Clrn1Q8K445 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clrn1Q8K445 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.58■□□□□ 0.89
Clrn1Q8K445 Gm5786-201ENSMUST00000085368 882 ntBASIC20.58■□□□□ 0.89
Clrn1Q8K445 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn1Q8K445 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn1Q8K445 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn1Q8K445 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn1Q8K445 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clrn1Q8K445 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.57■□□□□ 0.88
Clrn1Q8K445 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Clrn1Q8K445 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Clrn1Q8K445 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.56■□□□□ 0.88
Clrn1Q8K445 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn1Q8K445 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn1Q8K445 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clrn1Q8K445 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Clrn1Q8K445 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn1Q8K445 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn1Q8K445 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn1Q8K445 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Clrn1Q8K445 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn1Q8K445 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clrn1Q8K445 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.55■□□□□ 0.88
Clrn1Q8K445 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.55■□□□□ 0.88
Clrn1Q8K445 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Clrn1Q8K445 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn1Q8K445 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn1Q8K445 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn1Q8K445 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clrn1Q8K445 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Clrn1Q8K445 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clrn1Q8K445 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clrn1Q8K445 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clrn1Q8K445 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Clrn1Q8K445 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.52■□□□□ 0.88
Clrn1Q8K445 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.52■□□□□ 0.88
Clrn1Q8K445 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clrn1Q8K445 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.52■□□□□ 0.87
Clrn1Q8K445 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.51■□□□□ 0.87
Clrn1Q8K445 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clrn1Q8K445 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clrn1Q8K445 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clrn1Q8K445 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Clrn1Q8K445 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clrn1Q8K445 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Clrn1Q8K445 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clrn1Q8K445 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Clrn1Q8K445 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms