Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slc47a1Q8K0H1 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.48■■□□□ 1.03
Slc47a1Q8K0H1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc47a1Q8K0H1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.47■■□□□ 1.03
Slc47a1Q8K0H1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.47■■□□□ 1.03
Slc47a1Q8K0H1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc47a1Q8K0H1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Slc47a1Q8K0H1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc47a1Q8K0H1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc47a1Q8K0H1 Terc-201ENSMUST00000082862 423 ntBASIC21.46■■□□□ 1.03
Slc47a1Q8K0H1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc47a1Q8K0H1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.46■■□□□ 1.03
Slc47a1Q8K0H1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc47a1Q8K0H1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc47a1Q8K0H1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc47a1Q8K0H1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Slc47a1Q8K0H1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc47a1Q8K0H1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc47a1Q8K0H1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc47a1Q8K0H1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc47a1Q8K0H1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc47a1Q8K0H1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Slc47a1Q8K0H1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc47a1Q8K0H1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.43■■□□□ 1.02
Slc47a1Q8K0H1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc47a1Q8K0H1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc47a1Q8K0H1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc47a1Q8K0H1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc47a1Q8K0H1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc47a1Q8K0H1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc47a1Q8K0H1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.42■■□□□ 1.02
Slc47a1Q8K0H1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Slc47a1Q8K0H1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.42■■□□□ 1.02
Slc47a1Q8K0H1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc47a1Q8K0H1 Cap2-205ENSMUST00000225824 1634 ntBASIC21.42■■□□□ 1.02
Slc47a1Q8K0H1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc47a1Q8K0H1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc47a1Q8K0H1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc47a1Q8K0H1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Slc47a1Q8K0H1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc47a1Q8K0H1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.41■■□□□ 1.02
Slc47a1Q8K0H1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc47a1Q8K0H1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc47a1Q8K0H1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc47a1Q8K0H1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Slc47a1Q8K0H1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc47a1Q8K0H1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc47a1Q8K0H1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Slc47a1Q8K0H1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc47a1Q8K0H1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc47a1Q8K0H1 Scarna2-201ENSMUST00000157560 414 ntBASIC21.39■■□□□ 1.01
Slc47a1Q8K0H1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc47a1Q8K0H1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.37■■□□□ 1.01
Slc47a1Q8K0H1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc47a1Q8K0H1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc47a1Q8K0H1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc47a1Q8K0H1 Gm9806-201ENSMUST00000051080 552 ntBASIC21.36■■□□□ 1.01
Slc47a1Q8K0H1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Slc47a1Q8K0H1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc47a1Q8K0H1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc47a1Q8K0H1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.35■■□□□ 1.01
Slc47a1Q8K0H1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc47a1Q8K0H1 Gm16437-201ENSMUST00000025669 507 ntBASIC21.35■■□□□ 1.01
Slc47a1Q8K0H1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc47a1Q8K0H1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Slc47a1Q8K0H1 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc47a1Q8K0H1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms