Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Hist1h2aaQ8CGP4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h2aaQ8CGP4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.57■□□□□ 0.88
Hist1h2aaQ8CGP4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h2aaQ8CGP4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h2aaQ8CGP4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h2aaQ8CGP4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Hist1h2aaQ8CGP4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h2aaQ8CGP4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hist1h2aaQ8CGP4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hist1h2aaQ8CGP4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hist1h2aaQ8CGP4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hist1h2aaQ8CGP4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aaQ8CGP4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aaQ8CGP4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aaQ8CGP4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hist1h2aaQ8CGP4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aaQ8CGP4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hist1h2aaQ8CGP4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.53■□□□□ 0.88
Hist1h2aaQ8CGP4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hist1h2aaQ8CGP4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hist1h2aaQ8CGP4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h2aaQ8CGP4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h2aaQ8CGP4 Mir6538-201ENSMUST00000183713 110 ntBASIC20.52■□□□□ 0.88
Hist1h2aaQ8CGP4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h2aaQ8CGP4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h2aaQ8CGP4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hist1h2aaQ8CGP4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h2aaQ8CGP4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h2aaQ8CGP4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Hist1h2aaQ8CGP4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h2aaQ8CGP4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h2aaQ8CGP4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.51■□□□□ 0.87
Hist1h2aaQ8CGP4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Hist1h2aaQ8CGP4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hist1h2aaQ8CGP4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hist1h2aaQ8CGP4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aaQ8CGP4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aaQ8CGP4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.49■□□□□ 0.87
Hist1h2aaQ8CGP4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aaQ8CGP4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hist1h2aaQ8CGP4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aaQ8CGP4 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hist1h2aaQ8CGP4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.47■□□□□ 0.87
Hist1h2aaQ8CGP4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2aaQ8CGP4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2aaQ8CGP4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2aaQ8CGP4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2aaQ8CGP4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2aaQ8CGP4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2aaQ8CGP4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2aaQ8CGP4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2aaQ8CGP4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2aaQ8CGP4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2aaQ8CGP4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2aaQ8CGP4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2aaQ8CGP4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2aaQ8CGP4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2aaQ8CGP4 Gm27502-201ENSMUST00000183495 199 ntBASIC20.43■□□□□ 0.86
Hist1h2aaQ8CGP4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.43■□□□□ 0.86
Hist1h2aaQ8CGP4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2aaQ8CGP4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2aaQ8CGP4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Hist1h2aaQ8CGP4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h2aaQ8CGP4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hist1h2aaQ8CGP4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h2aaQ8CGP4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms