Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Golph3-202ENSMUST00000226517 2359 ntBASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist3h2bbQ8CGP0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hist3h2bbQ8CGP0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist3h2bbQ8CGP0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hist3h2bbQ8CGP0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist3h2bbQ8CGP0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hist3h2bbQ8CGP0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hist3h2bbQ8CGP0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist3h2bbQ8CGP0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Hist3h2bbQ8CGP0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist3h2bbQ8CGP0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Hist3h2bbQ8CGP0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hist3h2bbQ8CGP0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hist3h2bbQ8CGP0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hist3h2bbQ8CGP0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hist3h2bbQ8CGP0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
Hist3h2bbQ8CGP0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hist3h2bbQ8CGP0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Hist3h2bbQ8CGP0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hist3h2bbQ8CGP0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Hist3h2bbQ8CGP0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hist3h2bbQ8CGP0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist3h2bbQ8CGP0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist3h2bbQ8CGP0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hist3h2bbQ8CGP0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist3h2bbQ8CGP0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hist3h2bbQ8CGP0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist3h2bbQ8CGP0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist3h2bbQ8CGP0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist3h2bbQ8CGP0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Hist3h2bbQ8CGP0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist3h2bbQ8CGP0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hist3h2bbQ8CGP0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hist3h2bbQ8CGP0 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.74■□□□□ 0.27
Hist3h2bbQ8CGP0 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.74■□□□□ 0.27
Hist3h2bbQ8CGP0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Hist3h2bbQ8CGP0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hist3h2bbQ8CGP0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hist3h2bbQ8CGP0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hist3h2bbQ8CGP0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.73■□□□□ 0.27
Hist3h2bbQ8CGP0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hist3h2bbQ8CGP0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hist3h2bbQ8CGP0 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.72■□□□□ 0.27
Hist3h2bbQ8CGP0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hist3h2bbQ8CGP0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hist3h2bbQ8CGP0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hist3h2bbQ8CGP0 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.72■□□□□ 0.27
Hist3h2bbQ8CGP0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hist3h2bbQ8CGP0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hist3h2bbQ8CGP0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hist3h2bbQ8CGP0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hist3h2bbQ8CGP0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hist3h2bbQ8CGP0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hist3h2bbQ8CGP0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hist3h2bbQ8CGP0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hist3h2bbQ8CGP0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hist3h2bbQ8CGP0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist3h2bbQ8CGP0 Particl-201ENSMUST00000205370 1560 ntBASIC16.68■□□□□ 0.26
Hist3h2bbQ8CGP0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hist3h2bbQ8CGP0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist3h2bbQ8CGP0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist3h2bbQ8CGP0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.68■□□□□ 0.26
Hist3h2bbQ8CGP0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist3h2bbQ8CGP0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hist3h2bbQ8CGP0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist3h2bbQ8CGP0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist3h2bbQ8CGP0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist3h2bbQ8CGP0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hist3h2bbQ8CGP0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist3h2bbQ8CGP0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist3h2bbQ8CGP0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hist3h2bbQ8CGP0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hist3h2bbQ8CGP0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hist3h2bbQ8CGP0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Hist3h2bbQ8CGP0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms