Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc46a2Q8CA03 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc46a2Q8CA03 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc46a2Q8CA03 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc46a2Q8CA03 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc46a2Q8CA03 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc46a2Q8CA03 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Slc46a2Q8CA03 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.06■□□□□ 0.96
Slc46a2Q8CA03 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc46a2Q8CA03 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc46a2Q8CA03 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Slc46a2Q8CA03 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.04■□□□□ 0.96
Slc46a2Q8CA03 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc46a2Q8CA03 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc46a2Q8CA03 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc46a2Q8CA03 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Slc46a2Q8CA03 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc46a2Q8CA03 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Slc46a2Q8CA03 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc46a2Q8CA03 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc46a2Q8CA03 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.02■□□□□ 0.96
Slc46a2Q8CA03 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc46a2Q8CA03 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc46a2Q8CA03 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21■□□□□ 0.95
Slc46a2Q8CA03 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc46a2Q8CA03 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21■□□□□ 0.95
Slc46a2Q8CA03 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc46a2Q8CA03 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21■□□□□ 0.95
Slc46a2Q8CA03 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc46a2Q8CA03 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.98■□□□□ 0.95
Slc46a2Q8CA03 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.98■□□□□ 0.95
Slc46a2Q8CA03 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
Slc46a2Q8CA03 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc46a2Q8CA03 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.97■□□□□ 0.95
Slc46a2Q8CA03 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc46a2Q8CA03 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Slc46a2Q8CA03 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc46a2Q8CA03 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Slc46a2Q8CA03 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc46a2Q8CA03 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc46a2Q8CA03 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Slc46a2Q8CA03 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.96■□□□□ 0.95
Slc46a2Q8CA03 Gm6821-201ENSMUST00000107540 542 ntBASIC20.96■□□□□ 0.95
Slc46a2Q8CA03 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.96■□□□□ 0.95
Slc46a2Q8CA03 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.96■□□□□ 0.95
Slc46a2Q8CA03 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc46a2Q8CA03 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slc46a2Q8CA03 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc46a2Q8CA03 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc46a2Q8CA03 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc46a2Q8CA03 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc46a2Q8CA03 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc46a2Q8CA03 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.95■□□□□ 0.94
Slc46a2Q8CA03 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 Gm8503-201ENSMUST00000118131 455 ntBASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc46a2Q8CA03 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc46a2Q8CA03 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc46a2Q8CA03 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Slc46a2Q8CA03 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc46a2Q8CA03 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.93■□□□□ 0.94
Slc46a2Q8CA03 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms