Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim9Q8C7M3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim9Q8C7M3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim9Q8C7M3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim9Q8C7M3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.32■■□□□ 1.48
Trim9Q8C7M3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim9Q8C7M3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim9Q8C7M3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Trim9Q8C7M3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim9Q8C7M3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim9Q8C7M3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.3■■□□□ 1.48
Trim9Q8C7M3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Trim9Q8C7M3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Trim9Q8C7M3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim9Q8C7M3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.3■■□□□ 1.48
Trim9Q8C7M3 Gm22567-201ENSMUST00000175542 342 ntBASIC24.3■■□□□ 1.48
Trim9Q8C7M3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim9Q8C7M3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim9Q8C7M3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Trim9Q8C7M3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim9Q8C7M3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim9Q8C7M3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim9Q8C7M3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim9Q8C7M3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim9Q8C7M3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Trim9Q8C7M3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim9Q8C7M3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trim9Q8C7M3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim9Q8C7M3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Gm27502-201ENSMUST00000183495 199 ntBASIC24.27■■□□□ 1.48
Trim9Q8C7M3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.27■■□□□ 1.48
Trim9Q8C7M3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim9Q8C7M3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim9Q8C7M3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim9Q8C7M3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim9Q8C7M3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.26■■□□□ 1.47
Trim9Q8C7M3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Trim9Q8C7M3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim9Q8C7M3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim9Q8C7M3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim9Q8C7M3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim9Q8C7M3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim9Q8C7M3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim9Q8C7M3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.24■■□□□ 1.47
Trim9Q8C7M3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.24■■□□□ 1.47
Trim9Q8C7M3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trim9Q8C7M3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim9Q8C7M3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim9Q8C7M3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim9Q8C7M3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trim9Q8C7M3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim9Q8C7M3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim9Q8C7M3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Trim9Q8C7M3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim9Q8C7M3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Trim9Q8C7M3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Trim9Q8C7M3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Trim9Q8C7M3 Gm14523-201ENSMUST00000117260 558 ntBASIC24.2■■□□□ 1.46
Trim9Q8C7M3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.19■■□□□ 1.46
Trim9Q8C7M3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Trim9Q8C7M3 Mir6538-201ENSMUST00000183713 110 ntBASIC24.19■■□□□ 1.46
Trim9Q8C7M3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim9Q8C7M3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Trim9Q8C7M3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim9Q8C7M3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim9Q8C7M3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Trim9Q8C7M3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.18■■□□□ 1.46
Trim9Q8C7M3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Trim9Q8C7M3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim9Q8C7M3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim9Q8C7M3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.18■■□□□ 1.46
Trim9Q8C7M3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Trim9Q8C7M3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.17■■□□□ 1.46
Trim9Q8C7M3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim9Q8C7M3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim9Q8C7M3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim9Q8C7M3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.16■■□□□ 1.46
Trim9Q8C7M3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim9Q8C7M3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trim9Q8C7M3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trim9Q8C7M3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trim9Q8C7M3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.14■■□□□ 1.46
Trim9Q8C7M3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
Trim9Q8C7M3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms