Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.84■□□□□ 0.93
Eri3Q8C460 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Eri3Q8C460 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.84■□□□□ 0.93
Eri3Q8C460 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Eri3Q8C460 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Eri3Q8C460 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Eri3Q8C460 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Eri3Q8C460 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Eri3Q8C460 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.83■□□□□ 0.93
Eri3Q8C460 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Eri3Q8C460 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.83■□□□□ 0.92
Eri3Q8C460 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Eri3Q8C460 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Eri3Q8C460 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.83■□□□□ 0.92
Eri3Q8C460 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Eri3Q8C460 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Eri3Q8C460 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Eri3Q8C460 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.82■□□□□ 0.92
Eri3Q8C460 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Eri3Q8C460 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.81■□□□□ 0.92
Eri3Q8C460 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Eri3Q8C460 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Eri3Q8C460 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Eri3Q8C460 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Eri3Q8C460 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Eri3Q8C460 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Eri3Q8C460 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Eri3Q8C460 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Eri3Q8C460 Cap2-205ENSMUST00000225824 1634 ntBASIC20.8■□□□□ 0.92
Eri3Q8C460 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Eri3Q8C460 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Eri3Q8C460 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Eri3Q8C460 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Eri3Q8C460 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Eri3Q8C460 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Eri3Q8C460 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Eri3Q8C460 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Eri3Q8C460 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Eri3Q8C460 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Eri3Q8C460 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Eri3Q8C460 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Eri3Q8C460 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Eri3Q8C460 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Eri3Q8C460 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Eri3Q8C460 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Eri3Q8C460 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Eri3Q8C460 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Eri3Q8C460 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Eri3Q8C460 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Eri3Q8C460 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Eri3Q8C460 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Eri3Q8C460 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Eri3Q8C460 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Eri3Q8C460 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Eri3Q8C460 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Eri3Q8C460 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Eri3Q8C460 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Eri3Q8C460 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Eri3Q8C460 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Eri3Q8C460 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Eri3Q8C460 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.74■□□□□ 0.91
Eri3Q8C460 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Eri3Q8C460 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.74■□□□□ 0.91
Eri3Q8C460 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eri3Q8C460 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eri3Q8C460 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Eri3Q8C460 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.73■□□□□ 0.91
Eri3Q8C460 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.73■□□□□ 0.91
Eri3Q8C460 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eri3Q8C460 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eri3Q8C460 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Eri3Q8C460 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Eri3Q8C460 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Eri3Q8C460 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Eri3Q8C460 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Eri3Q8C460 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Eri3Q8C460 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Eri3Q8C460 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Eri3Q8C460 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eri3Q8C460 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eri3Q8C460 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eri3Q8C460 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eri3Q8C460 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Eri3Q8C460 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Eri3Q8C460 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.7■□□□□ 0.9
Eri3Q8C460 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Eri3Q8C460 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.69■□□□□ 0.9
Eri3Q8C460 Gm10420-201ENSMUST00000121713 882 ntBASIC20.69■□□□□ 0.9
Eri3Q8C460 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.69■□□□□ 0.9
Eri3Q8C460 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Eri3Q8C460 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Eri3Q8C460 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Eri3Q8C460 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Eri3Q8C460 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Eri3Q8C460 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Eri3Q8C460 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Eri3Q8C460 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Eri3Q8C460 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eri3Q8C460 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eri3Q8C460 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms