Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps9d1Q8C190 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.39■□□□□ 0.85
Vps9d1Q8C190 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Vps9d1Q8C190 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps9d1Q8C190 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps9d1Q8C190 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps9d1Q8C190 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps9d1Q8C190 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps9d1Q8C190 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.37■□□□□ 0.85
Vps9d1Q8C190 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps9d1Q8C190 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps9d1Q8C190 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.37■□□□□ 0.85
Vps9d1Q8C190 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps9d1Q8C190 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Gm4799-201ENSMUST00000095396 657 ntBASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Vps9d1Q8C190 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps9d1Q8C190 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps9d1Q8C190 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps9d1Q8C190 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Vps9d1Q8C190 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps9d1Q8C190 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps9d1Q8C190 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.35■□□□□ 0.85
Vps9d1Q8C190 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps9d1Q8C190 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.34■□□□□ 0.85
Vps9d1Q8C190 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps9d1Q8C190 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps9d1Q8C190 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps9d1Q8C190 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps9d1Q8C190 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Vps9d1Q8C190 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vps9d1Q8C190 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps9d1Q8C190 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Vps9d1Q8C190 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps9d1Q8C190 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.33■□□□□ 0.85
Vps9d1Q8C190 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.33■□□□□ 0.85
Vps9d1Q8C190 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Vps9d1Q8C190 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vps9d1Q8C190 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps9d1Q8C190 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Vps9d1Q8C190 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps9d1Q8C190 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Vps9d1Q8C190 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.32■□□□□ 0.84
Vps9d1Q8C190 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps9d1Q8C190 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.31■□□□□ 0.84
Vps9d1Q8C190 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vps9d1Q8C190 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps9d1Q8C190 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vps9d1Q8C190 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps9d1Q8C190 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.3■□□□□ 0.84
Vps9d1Q8C190 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vps9d1Q8C190 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps9d1Q8C190 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps9d1Q8C190 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps9d1Q8C190 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps9d1Q8C190 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps9d1Q8C190 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps9d1Q8C190 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps9d1Q8C190 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps9d1Q8C190 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps9d1Q8C190 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps9d1Q8C190 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps9d1Q8C190 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.27■□□□□ 0.84
Vps9d1Q8C190 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.27■□□□□ 0.84
Vps9d1Q8C190 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps9d1Q8C190 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vps9d1Q8C190 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.27■□□□□ 0.83
Vps9d1Q8C190 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vps9d1Q8C190 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vps9d1Q8C190 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Vps9d1Q8C190 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.26■□□□□ 0.83
Vps9d1Q8C190 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps9d1Q8C190 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps9d1Q8C190 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps9d1Q8C190 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.25■□□□□ 0.83
Vps9d1Q8C190 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms