Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne3Q8BT60 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne3Q8BT60 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cpne3Q8BT60 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.06■□□□□ 0.96
Cpne3Q8BT60 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne3Q8BT60 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne3Q8BT60 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne3Q8BT60 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.05■□□□□ 0.96
Cpne3Q8BT60 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne3Q8BT60 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cpne3Q8BT60 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cpne3Q8BT60 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne3Q8BT60 Gm6311-201ENSMUST00000073790 878 ntBASIC21.04■□□□□ 0.96
Cpne3Q8BT60 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne3Q8BT60 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne3Q8BT60 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne3Q8BT60 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne3Q8BT60 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cpne3Q8BT60 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne3Q8BT60 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne3Q8BT60 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne3Q8BT60 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne3Q8BT60 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne3Q8BT60 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne3Q8BT60 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne3Q8BT60 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne3Q8BT60 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.02■□□□□ 0.96
Cpne3Q8BT60 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cpne3Q8BT60 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne3Q8BT60 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne3Q8BT60 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpne3Q8BT60 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpne3Q8BT60 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne3Q8BT60 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne3Q8BT60 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.01■□□□□ 0.95
Cpne3Q8BT60 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cpne3Q8BT60 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21■□□□□ 0.95
Cpne3Q8BT60 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne3Q8BT60 Gm9910-201ENSMUST00000195385 1550 ntBASIC21■□□□□ 0.95
Cpne3Q8BT60 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne3Q8BT60 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne3Q8BT60 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cpne3Q8BT60 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne3Q8BT60 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne3Q8BT60 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne3Q8BT60 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne3Q8BT60 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne3Q8BT60 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.98■□□□□ 0.95
Cpne3Q8BT60 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne3Q8BT60 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne3Q8BT60 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne3Q8BT60 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne3Q8BT60 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cpne3Q8BT60 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.97■□□□□ 0.95
Cpne3Q8BT60 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.97■□□□□ 0.95
Cpne3Q8BT60 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne3Q8BT60 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne3Q8BT60 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne3Q8BT60 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cpne3Q8BT60 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne3Q8BT60 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne3Q8BT60 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne3Q8BT60 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne3Q8BT60 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cpne3Q8BT60 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cpne3Q8BT60 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne3Q8BT60 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne3Q8BT60 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.95■□□□□ 0.94
Cpne3Q8BT60 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.95■□□□□ 0.94
Cpne3Q8BT60 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne3Q8BT60 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne3Q8BT60 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne3Q8BT60 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.94■□□□□ 0.94
Cpne3Q8BT60 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne3Q8BT60 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cpne3Q8BT60 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne3Q8BT60 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne3Q8BT60 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne3Q8BT60 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne3Q8BT60 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne3Q8BT60 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Cpne3Q8BT60 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne3Q8BT60 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms