Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim23Q8BGX0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim23Q8BGX0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim23Q8BGX0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim23Q8BGX0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.21■□□□□ 0.99
Trim23Q8BGX0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim23Q8BGX0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim23Q8BGX0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim23Q8BGX0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim23Q8BGX0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim23Q8BGX0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim23Q8BGX0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim23Q8BGX0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim23Q8BGX0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim23Q8BGX0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim23Q8BGX0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim23Q8BGX0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim23Q8BGX0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim23Q8BGX0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Trim23Q8BGX0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim23Q8BGX0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim23Q8BGX0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim23Q8BGX0 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.17■□□□□ 0.98
Trim23Q8BGX0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim23Q8BGX0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim23Q8BGX0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim23Q8BGX0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim23Q8BGX0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Trim23Q8BGX0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim23Q8BGX0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim23Q8BGX0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.15■□□□□ 0.98
Trim23Q8BGX0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim23Q8BGX0 Gm5921-201ENSMUST00000075898 882 ntBASIC21.15■□□□□ 0.98
Trim23Q8BGX0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim23Q8BGX0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim23Q8BGX0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.14■□□□□ 0.98
Trim23Q8BGX0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim23Q8BGX0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Trim23Q8BGX0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim23Q8BGX0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim23Q8BGX0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim23Q8BGX0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim23Q8BGX0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim23Q8BGX0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.13■□□□□ 0.97
Trim23Q8BGX0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim23Q8BGX0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim23Q8BGX0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim23Q8BGX0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trim23Q8BGX0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim23Q8BGX0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim23Q8BGX0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.12■□□□□ 0.97
Trim23Q8BGX0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim23Q8BGX0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim23Q8BGX0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim23Q8BGX0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim23Q8BGX0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim23Q8BGX0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim23Q8BGX0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
Trim23Q8BGX0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim23Q8BGX0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim23Q8BGX0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim23Q8BGX0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim23Q8BGX0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim23Q8BGX0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim23Q8BGX0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim23Q8BGX0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim23Q8BGX0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim23Q8BGX0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim23Q8BGX0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim23Q8BGX0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim23Q8BGX0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trim23Q8BGX0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim23Q8BGX0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim23Q8BGX0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.08■□□□□ 0.96
Trim23Q8BGX0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim23Q8BGX0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim23Q8BGX0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim23Q8BGX0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim23Q8BGX0 Gm22567-201ENSMUST00000175542 342 ntBASIC21.07■□□□□ 0.96
Trim23Q8BGX0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim23Q8BGX0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim23Q8BGX0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.07■□□□□ 0.96
Trim23Q8BGX0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim23Q8BGX0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim23Q8BGX0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim23Q8BGX0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim23Q8BGX0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim23Q8BGX0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim23Q8BGX0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim23Q8BGX0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim23Q8BGX0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms