Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim50Q810I2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trim50Q810I2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim50Q810I2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim50Q810I2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim50Q810I2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Trim50Q810I2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim50Q810I2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim50Q810I2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim50Q810I2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim50Q810I2 Gm14523-201ENSMUST00000117260 558 ntBASIC21.3■■□□□ 1
Trim50Q810I2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.3■■□□□ 1
Trim50Q810I2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.29■■□□□ 1
Trim50Q810I2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Trim50Q810I2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim50Q810I2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim50Q810I2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim50Q810I2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim50Q810I2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim50Q810I2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim50Q810I2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim50Q810I2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Trim50Q810I2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim50Q810I2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim50Q810I2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim50Q810I2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim50Q810I2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.27■■□□□ 1
Trim50Q810I2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trim50Q810I2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim50Q810I2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trim50Q810I2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim50Q810I2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.26■□□□□ 0.99
Trim50Q810I2 Gm12366-201ENSMUST00000121722 873 ntBASIC21.26■□□□□ 0.99
Trim50Q810I2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim50Q810I2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.26■□□□□ 0.99
Trim50Q810I2 Gm5786-201ENSMUST00000085368 882 ntBASIC21.26■□□□□ 0.99
Trim50Q810I2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Trim50Q810I2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim50Q810I2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim50Q810I2 Gm7332-201ENSMUST00000118351 454 ntBASIC21.25■□□□□ 0.99
Trim50Q810I2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim50Q810I2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim50Q810I2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.24■□□□□ 0.99
Trim50Q810I2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim50Q810I2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim50Q810I2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.24■□□□□ 0.99
Trim50Q810I2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim50Q810I2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim50Q810I2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim50Q810I2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim50Q810I2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim50Q810I2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim50Q810I2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trim50Q810I2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim50Q810I2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim50Q810I2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim50Q810I2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim50Q810I2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim50Q810I2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim50Q810I2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim50Q810I2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim50Q810I2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trim50Q810I2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim50Q810I2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim50Q810I2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim50Q810I2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim50Q810I2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim50Q810I2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim50Q810I2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim50Q810I2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim50Q810I2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim50Q810I2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim50Q810I2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim50Q810I2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim50Q810I2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim50Q810I2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim50Q810I2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim50Q810I2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Trim50Q810I2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim50Q810I2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim50Q810I2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim50Q810I2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim50Q810I2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim50Q810I2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.18■□□□□ 0.98
Trim50Q810I2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim50Q810I2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim50Q810I2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim50Q810I2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Trim50Q810I2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.17■□□□□ 0.98
Trim50Q810I2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim50Q810I2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim50Q810I2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms