Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bQ80YF6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Gm4799-201ENSMUST00000095396 657 ntBASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bQ80YF6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bQ80YF6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bQ80YF6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bQ80YF6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bQ80YF6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bQ80YF6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Upk3bQ80YF6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bQ80YF6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.47■□□□□ 0.55
Upk3bQ80YF6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bQ80YF6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bQ80YF6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bQ80YF6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bQ80YF6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk3bQ80YF6 Gm22567-201ENSMUST00000175542 342 ntBASIC18.45■□□□□ 0.54
Upk3bQ80YF6 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.45■□□□□ 0.54
Upk3bQ80YF6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk3bQ80YF6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Upk3bQ80YF6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Upk3bQ80YF6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bQ80YF6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bQ80YF6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bQ80YF6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Upk3bQ80YF6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
Upk3bQ80YF6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Upk3bQ80YF6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Upk3bQ80YF6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk3bQ80YF6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.43■□□□□ 0.54
Upk3bQ80YF6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Upk3bQ80YF6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk3bQ80YF6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk3bQ80YF6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Upk3bQ80YF6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk3bQ80YF6 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Gm9812-201ENSMUST00000061934 968 ntBASIC18.42■□□□□ 0.54
Upk3bQ80YF6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bQ80YF6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bQ80YF6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Upk3bQ80YF6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Upk3bQ80YF6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bQ80YF6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bQ80YF6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bQ80YF6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bQ80YF6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Upk3bQ80YF6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.39■□□□□ 0.53
Upk3bQ80YF6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk3bQ80YF6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk3bQ80YF6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms