Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sh3tc2Q80VA5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sh3tc2Q80VA5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Sh3tc2Q80VA5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Sh3tc2Q80VA5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3tc2Q80VA5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3tc2Q80VA5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3tc2Q80VA5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3tc2Q80VA5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Sh3tc2Q80VA5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3tc2Q80VA5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Sh3tc2Q80VA5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3tc2Q80VA5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Sh3tc2Q80VA5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.87■■□□□ 1.41
Sh3tc2Q80VA5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3tc2Q80VA5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sh3tc2Q80VA5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sh3tc2Q80VA5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Sh3tc2Q80VA5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sh3tc2Q80VA5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sh3tc2Q80VA5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3tc2Q80VA5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Sh3tc2Q80VA5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3tc2Q80VA5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3tc2Q80VA5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3tc2Q80VA5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3tc2Q80VA5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3tc2Q80VA5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3tc2Q80VA5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3tc2Q80VA5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3tc2Q80VA5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3tc2Q80VA5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3tc2Q80VA5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Sh3tc2Q80VA5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3tc2Q80VA5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3tc2Q80VA5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3tc2Q80VA5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Sh3tc2Q80VA5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Sh3tc2Q80VA5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Sh3tc2Q80VA5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3tc2Q80VA5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3tc2Q80VA5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Sh3tc2Q80VA5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3tc2Q80VA5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3tc2Q80VA5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3tc2Q80VA5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3tc2Q80VA5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3tc2Q80VA5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.8■■□□□ 1.4
Sh3tc2Q80VA5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3tc2Q80VA5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3tc2Q80VA5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3tc2Q80VA5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3tc2Q80VA5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3tc2Q80VA5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.79■■□□□ 1.4
Sh3tc2Q80VA5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3tc2Q80VA5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3tc2Q80VA5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3tc2Q80VA5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3tc2Q80VA5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3tc2Q80VA5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Sh3tc2Q80VA5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3tc2Q80VA5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sh3tc2Q80VA5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.77■■□□□ 1.4
Sh3tc2Q80VA5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sh3tc2Q80VA5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sh3tc2Q80VA5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.77■■□□□ 1.4
Sh3tc2Q80VA5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.77■■□□□ 1.4
Sh3tc2Q80VA5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sh3tc2Q80VA5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sh3tc2Q80VA5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sh3tc2Q80VA5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.76■■□□□ 1.39
Sh3tc2Q80VA5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Sh3tc2Q80VA5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3tc2Q80VA5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3tc2Q80VA5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3tc2Q80VA5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3tc2Q80VA5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.74■■□□□ 1.39
Sh3tc2Q80VA5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3tc2Q80VA5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3tc2Q80VA5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.74■■□□□ 1.39
Sh3tc2Q80VA5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3tc2Q80VA5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sh3tc2Q80VA5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms