Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Exosc3Q7TQK4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Exosc3Q7TQK4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Exosc3Q7TQK4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Exosc3Q7TQK4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Exosc3Q7TQK4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Exosc3Q7TQK4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Exosc3Q7TQK4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Exosc3Q7TQK4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Exosc3Q7TQK4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Exosc3Q7TQK4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 Gm10420-201ENSMUST00000121713 882 ntBASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Exosc3Q7TQK4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Exosc3Q7TQK4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Exosc3Q7TQK4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Exosc3Q7TQK4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Exosc3Q7TQK4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Exosc3Q7TQK4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.17■□□□□ 0.82
Exosc3Q7TQK4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Exosc3Q7TQK4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.17■□□□□ 0.82
Exosc3Q7TQK4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Exosc3Q7TQK4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Exosc3Q7TQK4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Exosc3Q7TQK4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Exosc3Q7TQK4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Exosc3Q7TQK4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.16■□□□□ 0.82
Exosc3Q7TQK4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Exosc3Q7TQK4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Exosc3Q7TQK4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Exosc3Q7TQK4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Gm22567-201ENSMUST00000175542 342 ntBASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Exosc3Q7TQK4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Exosc3Q7TQK4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Exosc3Q7TQK4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Exosc3Q7TQK4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Exosc3Q7TQK4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Exosc3Q7TQK4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Exosc3Q7TQK4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Exosc3Q7TQK4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Exosc3Q7TQK4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Exosc3Q7TQK4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Exosc3Q7TQK4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Exosc3Q7TQK4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Exosc3Q7TQK4 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.12■□□□□ 0.81
Exosc3Q7TQK4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Exosc3Q7TQK4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Exosc3Q7TQK4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Exosc3Q7TQK4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Exosc3Q7TQK4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Exosc3Q7TQK4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Exosc3Q7TQK4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Exosc3Q7TQK4 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.1■□□□□ 0.81
Exosc3Q7TQK4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Exosc3Q7TQK4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Exosc3Q7TQK4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Exosc3Q7TQK4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Exosc3Q7TQK4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Exosc3Q7TQK4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Exosc3Q7TQK4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Exosc3Q7TQK4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Exosc3Q7TQK4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Exosc3Q7TQK4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Exosc3Q7TQK4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.08■□□□□ 0.81
Exosc3Q7TQK4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Exosc3Q7TQK4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.08■□□□□ 0.81
Exosc3Q7TQK4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Exosc3Q7TQK4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.08■□□□□ 0.81
Exosc3Q7TQK4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.08■□□□□ 0.8
Exosc3Q7TQK4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.08■□□□□ 0.8
Exosc3Q7TQK4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Exosc3Q7TQK4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Exosc3Q7TQK4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Exosc3Q7TQK4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Exosc3Q7TQK4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Exosc3Q7TQK4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms