Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Scn10aQ6QIY3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Scn10aQ6QIY3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Scn10aQ6QIY3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Scn10aQ6QIY3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Scn10aQ6QIY3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Scn10aQ6QIY3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Scn10aQ6QIY3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Scn10aQ6QIY3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.74■■□□□ 1.71
Scn10aQ6QIY3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Gm22238-201ENSMUST00000175222 88 ntBASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Scn10aQ6QIY3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Scn10aQ6QIY3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Scn10aQ6QIY3 Gm7417-201ENSMUST00000192950 473 ntBASIC25.71■■□□□ 1.71
Scn10aQ6QIY3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.71■■□□□ 1.71
Scn10aQ6QIY3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Scn10aQ6QIY3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Scn10aQ6QIY3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Scn10aQ6QIY3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Scn10aQ6QIY3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Scn10aQ6QIY3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Scn10aQ6QIY3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Scn10aQ6QIY3 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.64■■□□□ 1.69
Scn10aQ6QIY3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Scn10aQ6QIY3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC25.64■■□□□ 1.69
Scn10aQ6QIY3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Scn10aQ6QIY3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.63■■□□□ 1.69
Scn10aQ6QIY3 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.63■■□□□ 1.69
Scn10aQ6QIY3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Scn10aQ6QIY3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 Gm40881-201ENSMUST00000223397 166 ntBASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 Gm9847-201ENSMUST00000052528 599 ntBASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scn10aQ6QIY3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scn10aQ6QIY3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
Scn10aQ6QIY3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Gm12922-201ENSMUST00000120626 809 ntBASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scn10aQ6QIY3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scn10aQ6QIY3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Scn10aQ6QIY3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scn10aQ6QIY3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scn10aQ6QIY3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Scn10aQ6QIY3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms