Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sdc3Q64519 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.96■□□□□ 0.95
Sdc3Q64519 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc3Q64519 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc3Q64519 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc3Q64519 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc3Q64519 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc3Q64519 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc3Q64519 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sdc3Q64519 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.95■□□□□ 0.94
Sdc3Q64519 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Sdc3Q64519 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc3Q64519 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc3Q64519 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc3Q64519 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sdc3Q64519 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc3Q64519 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sdc3Q64519 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc3Q64519 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc3Q64519 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.93■□□□□ 0.94
Sdc3Q64519 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc3Q64519 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.93■□□□□ 0.94
Sdc3Q64519 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Sdc3Q64519 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc3Q64519 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc3Q64519 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.92■□□□□ 0.94
Sdc3Q64519 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc3Q64519 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.92■□□□□ 0.94
Sdc3Q64519 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc3Q64519 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc3Q64519 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc3Q64519 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc3Q64519 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc3Q64519 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Sdc3Q64519 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.91■□□□□ 0.94
Sdc3Q64519 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc3Q64519 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc3Q64519 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc3Q64519 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc3Q64519 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc3Q64519 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc3Q64519 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc3Q64519 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc3Q64519 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.9■□□□□ 0.94
Sdc3Q64519 Gm5921-201ENSMUST00000075898 882 ntBASIC20.9■□□□□ 0.94
Sdc3Q64519 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc3Q64519 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc3Q64519 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc3Q64519 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc3Q64519 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.89■□□□□ 0.93
Sdc3Q64519 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc3Q64519 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc3Q64519 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc3Q64519 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Sdc3Q64519 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sdc3Q64519 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.88■□□□□ 0.93
Sdc3Q64519 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc3Q64519 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc3Q64519 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Sdc3Q64519 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc3Q64519 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc3Q64519 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc3Q64519 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc3Q64519 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.86■□□□□ 0.93
Sdc3Q64519 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.86■□□□□ 0.93
Sdc3Q64519 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc3Q64519 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc3Q64519 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc3Q64519 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sdc3Q64519 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sdc3Q64519 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc3Q64519 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sdc3Q64519 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc3Q64519 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sdc3Q64519 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.84■□□□□ 0.93
Sdc3Q64519 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sdc3Q64519 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc3Q64519 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.83■□□□□ 0.93
Sdc3Q64519 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.83■□□□□ 0.93
Sdc3Q64519 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc3Q64519 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sdc3Q64519 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sdc3Q64519 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc3Q64519 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc3Q64519 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sdc3Q64519 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc3Q64519 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc3Q64519 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sdc3Q64519 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc3Q64519 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Sdc3Q64519 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 127.9 ms