Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scn9aQ62205 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scn9aQ62205 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scn9aQ62205 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scn9aQ62205 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scn9aQ62205 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scn9aQ62205 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Scn9aQ62205 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Scn9aQ62205 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
Scn9aQ62205 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.64■■□□□ 1.85
Scn9aQ62205 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Scn9aQ62205 Gm9847-201ENSMUST00000052528 599 ntBASIC26.64■■□□□ 1.85
Scn9aQ62205 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.63■■□□□ 1.85
Scn9aQ62205 Gm7417-201ENSMUST00000192950 473 ntBASIC26.63■■□□□ 1.85
Scn9aQ62205 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Scn9aQ62205 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Scn9aQ62205 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scn9aQ62205 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.62■■□□□ 1.85
Scn9aQ62205 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.61■■□□□ 1.85
Scn9aQ62205 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC26.61■■□□□ 1.85
Scn9aQ62205 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC26.61■■□□□ 1.85
Scn9aQ62205 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Scn9aQ62205 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Scn9aQ62205 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Scn9aQ62205 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Scn9aQ62205 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Scn9aQ62205 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.6■■□□□ 1.85
Scn9aQ62205 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Scn9aQ62205 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scn9aQ62205 Gm22238-201ENSMUST00000175222 88 ntBASIC26.58■■□□□ 1.85
Scn9aQ62205 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.58■■□□□ 1.85
Scn9aQ62205 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scn9aQ62205 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.58■■□□□ 1.85
Scn9aQ62205 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Scn9aQ62205 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.58■■□□□ 1.84
Scn9aQ62205 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.57■■□□□ 1.84
Scn9aQ62205 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Scn9aQ62205 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scn9aQ62205 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.57■■□□□ 1.84
Scn9aQ62205 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scn9aQ62205 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scn9aQ62205 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.56■■□□□ 1.84
Scn9aQ62205 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Scn9aQ62205 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Scn9aQ62205 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.56■■□□□ 1.84
Scn9aQ62205 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Scn9aQ62205 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Scn9aQ62205 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Scn9aQ62205 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Scn9aQ62205 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC26.55■■□□□ 1.84
Scn9aQ62205 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Scn9aQ62205 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scn9aQ62205 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scn9aQ62205 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scn9aQ62205 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Scn9aQ62205 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scn9aQ62205 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.53■■□□□ 1.84
Scn9aQ62205 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC26.53■■□□□ 1.84
Scn9aQ62205 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Scn9aQ62205 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scn9aQ62205 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scn9aQ62205 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scn9aQ62205 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scn9aQ62205 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Scn9aQ62205 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Scn9aQ62205 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.51■■□□□ 1.83
Scn9aQ62205 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.51■■□□□ 1.83
Scn9aQ62205 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Scn9aQ62205 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scn9aQ62205 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scn9aQ62205 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC26.5■■□□□ 1.83
Scn9aQ62205 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.5■■□□□ 1.83
Scn9aQ62205 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scn9aQ62205 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Scn9aQ62205 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
Scn9aQ62205 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Scn9aQ62205 Gm12922-201ENSMUST00000120626 809 ntBASIC26.49■■□□□ 1.83
Scn9aQ62205 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Scn9aQ62205 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Scn9aQ62205 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC26.49■■□□□ 1.83
Scn9aQ62205 Gm5297-201ENSMUST00000198555 1171 ntBASIC26.49■■□□□ 1.83
Scn9aQ62205 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Scn9aQ62205 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scn9aQ62205 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.47■■□□□ 1.83
Scn9aQ62205 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scn9aQ62205 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scn9aQ62205 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC26.47■■□□□ 1.83
Scn9aQ62205 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC26.47■■□□□ 1.83
Scn9aQ62205 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scn9aQ62205 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.46■■□□□ 1.83
Scn9aQ62205 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.46■■□□□ 1.83
Scn9aQ62205 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Scn9aQ62205 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.45■■□□□ 1.82
Scn9aQ62205 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scn9aQ62205 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.45■■□□□ 1.82
Scn9aQ62205 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scn9aQ62205 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scn9aQ62205 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Scn9aQ62205 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Scn9aQ62205 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms