Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-2Q5R1I3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-2Q5R1I3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-2Q5R1I3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-2Q5R1I3 Terc-201ENSMUST00000082862 423 ntBASIC16.16■□□□□ 0.18
Trav7-2Q5R1I3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav7-2Q5R1I3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-2Q5R1I3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav7-2Q5R1I3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Trav7-2Q5R1I3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-2Q5R1I3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Trav7-2Q5R1I3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-2Q5R1I3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-2Q5R1I3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-2Q5R1I3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav7-2Q5R1I3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-2Q5R1I3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-2Q5R1I3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-2Q5R1I3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trav7-2Q5R1I3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-2Q5R1I3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-2Q5R1I3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-2Q5R1I3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-2Q5R1I3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-2Q5R1I3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav7-2Q5R1I3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-2Q5R1I3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.11■□□□□ 0.17
Trav7-2Q5R1I3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav7-2Q5R1I3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav7-2Q5R1I3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.11■□□□□ 0.17
Trav7-2Q5R1I3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-2Q5R1I3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-2Q5R1I3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-2Q5R1I3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-2Q5R1I3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-2Q5R1I3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-2Q5R1I3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-2Q5R1I3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav7-2Q5R1I3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-2Q5R1I3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav7-2Q5R1I3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-2Q5R1I3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-2Q5R1I3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7-2Q5R1I3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trav7-2Q5R1I3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7-2Q5R1I3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-2Q5R1I3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav7-2Q5R1I3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav7-2Q5R1I3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-2Q5R1I3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-2Q5R1I3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-2Q5R1I3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-2Q5R1I3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav7-2Q5R1I3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-2Q5R1I3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-2Q5R1I3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-2Q5R1I3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav7-2Q5R1I3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-2Q5R1I3 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms