Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav8d-2Q5R1B6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav8d-2Q5R1B6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav8d-2Q5R1B6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.8■■□□□ 1.08
Trav8d-2Q5R1B6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.8■■□□□ 1.08
Trav8d-2Q5R1B6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav8d-2Q5R1B6 Gm22238-201ENSMUST00000175222 88 ntBASIC21.8■■□□□ 1.08
Trav8d-2Q5R1B6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.8■■□□□ 1.08
Trav8d-2Q5R1B6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav8d-2Q5R1B6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trav8d-2Q5R1B6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.79■■□□□ 1.08
Trav8d-2Q5R1B6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.79■■□□□ 1.08
Trav8d-2Q5R1B6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav8d-2Q5R1B6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav8d-2Q5R1B6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trav8d-2Q5R1B6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trav8d-2Q5R1B6 Gm40881-201ENSMUST00000223397 166 ntBASIC21.78■■□□□ 1.08
Trav8d-2Q5R1B6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.78■■□□□ 1.08
Trav8d-2Q5R1B6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Trav8d-2Q5R1B6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trav8d-2Q5R1B6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trav8d-2Q5R1B6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav8d-2Q5R1B6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav8d-2Q5R1B6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav8d-2Q5R1B6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav8d-2Q5R1B6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 Gm21956-201ENSMUST00000179946 522 ntBASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.75■■□□□ 1.07
Trav8d-2Q5R1B6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trav8d-2Q5R1B6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.73■■□□□ 1.07
Trav8d-2Q5R1B6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav8d-2Q5R1B6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav8d-2Q5R1B6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav8d-2Q5R1B6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trav8d-2Q5R1B6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav8d-2Q5R1B6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.71■■□□□ 1.07
Trav8d-2Q5R1B6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav8d-2Q5R1B6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav8d-2Q5R1B6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.7■■□□□ 1.06
Trav8d-2Q5R1B6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Trav8d-2Q5R1B6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav8d-2Q5R1B6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav8d-2Q5R1B6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.7■■□□□ 1.06
Trav8d-2Q5R1B6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav8d-2Q5R1B6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trav8d-2Q5R1B6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav8d-2Q5R1B6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trav8d-2Q5R1B6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trav8d-2Q5R1B6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav8d-2Q5R1B6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trav8d-2Q5R1B6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav8d-2Q5R1B6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav8d-2Q5R1B6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Gm12922-201ENSMUST00000120626 809 ntBASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.68■■□□□ 1.06
Trav8d-2Q5R1B6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.67■■□□□ 1.06
Trav8d-2Q5R1B6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trav8d-2Q5R1B6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trav8d-2Q5R1B6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav8d-2Q5R1B6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.66■■□□□ 1.06
Trav8d-2Q5R1B6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trav8d-2Q5R1B6 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.66■■□□□ 1.06
Trav8d-2Q5R1B6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav8d-2Q5R1B6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav8d-2Q5R1B6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav8d-2Q5R1B6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.65■■□□□ 1.06
Trav8d-2Q5R1B6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trav8d-2Q5R1B6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav8d-2Q5R1B6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trav8d-2Q5R1B6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trav8d-2Q5R1B6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.64■■□□□ 1.05
Trav8d-2Q5R1B6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav8d-2Q5R1B6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav8d-2Q5R1B6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav8d-2Q5R1B6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav8d-2Q5R1B6 Gm12821-201ENSMUST00000120022 600 ntBASIC21.62■■□□□ 1.05
Trav8d-2Q5R1B6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trav8d-2Q5R1B6 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms