Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Vps13aQ5H8C4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
Vps13aQ5H8C4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.42■■□□□ 1.18
Vps13aQ5H8C4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Vps13aQ5H8C4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Vps13aQ5H8C4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vps13aQ5H8C4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.41■■□□□ 1.18
Vps13aQ5H8C4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vps13aQ5H8C4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.41■■□□□ 1.18
Vps13aQ5H8C4 Golgb1-201ENSMUST00000023534 498 ntBASIC22.41■■□□□ 1.18
Vps13aQ5H8C4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vps13aQ5H8C4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vps13aQ5H8C4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Vps13aQ5H8C4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.4■■□□□ 1.18
Vps13aQ5H8C4 Gm45417-201ENSMUST00000209533 758 ntBASIC22.4■■□□□ 1.18
Vps13aQ5H8C4 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.4■■□□□ 1.18
Vps13aQ5H8C4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Vps13aQ5H8C4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.4■■□□□ 1.18
Vps13aQ5H8C4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.39■■□□□ 1.18
Vps13aQ5H8C4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Vps13aQ5H8C4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Vps13aQ5H8C4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vps13aQ5H8C4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps13aQ5H8C4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps13aQ5H8C4 Gm18284-201ENSMUST00000172604 624 ntBASIC22.38■■□□□ 1.17
Vps13aQ5H8C4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Vps13aQ5H8C4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.38■■□□□ 1.17
Vps13aQ5H8C4 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.38■■□□□ 1.17
Vps13aQ5H8C4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
Vps13aQ5H8C4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vps13aQ5H8C4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Vps13aQ5H8C4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.36■■□□□ 1.17
Vps13aQ5H8C4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vps13aQ5H8C4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Vps13aQ5H8C4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps13aQ5H8C4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps13aQ5H8C4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps13aQ5H8C4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps13aQ5H8C4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vps13aQ5H8C4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vps13aQ5H8C4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps13aQ5H8C4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vps13aQ5H8C4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vps13aQ5H8C4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.33■■□□□ 1.17
Vps13aQ5H8C4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Vps13aQ5H8C4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.33■■□□□ 1.16
Vps13aQ5H8C4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.16
Vps13aQ5H8C4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Vps13aQ5H8C4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vps13aQ5H8C4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vps13aQ5H8C4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vps13aQ5H8C4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.31■■□□□ 1.16
Vps13aQ5H8C4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vps13aQ5H8C4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vps13aQ5H8C4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vps13aQ5H8C4 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.31■■□□□ 1.16
Vps13aQ5H8C4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps13aQ5H8C4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.3■■□□□ 1.16
Vps13aQ5H8C4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vps13aQ5H8C4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vps13aQ5H8C4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vps13aQ5H8C4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vps13aQ5H8C4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vps13aQ5H8C4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Vps13aQ5H8C4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Vps13aQ5H8C4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vps13aQ5H8C4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Vps13aQ5H8C4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps13aQ5H8C4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Vps13aQ5H8C4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.26■■□□□ 1.15
Vps13aQ5H8C4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.26■■□□□ 1.15
Vps13aQ5H8C4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps13aQ5H8C4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps13aQ5H8C4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps13aQ5H8C4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.25■■□□□ 1.15
Vps13aQ5H8C4 Gm40881-201ENSMUST00000223397 166 ntBASIC22.25■■□□□ 1.15
Vps13aQ5H8C4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps13aQ5H8C4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps13aQ5H8C4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps13aQ5H8C4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.25■■□□□ 1.15
Vps13aQ5H8C4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.25■■□□□ 1.15
Vps13aQ5H8C4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps13aQ5H8C4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.24■■□□□ 1.15
Vps13aQ5H8C4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
Vps13aQ5H8C4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps13aQ5H8C4 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.23■■□□□ 1.15
Vps13aQ5H8C4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps13aQ5H8C4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Vps13aQ5H8C4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps13aQ5H8C4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.22■■□□□ 1.15
Vps13aQ5H8C4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms