Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.26■□□□□ 0.83
Urb1Q571H0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Urb1Q571H0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Urb1Q571H0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.26■□□□□ 0.83
Urb1Q571H0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Urb1Q571H0 Gm9847-201ENSMUST00000052528 599 ntBASIC20.25■□□□□ 0.83
Urb1Q571H0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Urb1Q571H0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Urb1Q571H0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Urb1Q571H0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.25■□□□□ 0.83
Urb1Q571H0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Urb1Q571H0 Gm7417-201ENSMUST00000192950 473 ntBASIC20.24■□□□□ 0.83
Urb1Q571H0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Urb1Q571H0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Urb1Q571H0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Urb1Q571H0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Urb1Q571H0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.23■□□□□ 0.83
Urb1Q571H0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Urb1Q571H0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Urb1Q571H0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Urb1Q571H0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Urb1Q571H0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Urb1Q571H0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.22■□□□□ 0.83
Urb1Q571H0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Urb1Q571H0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Urb1Q571H0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Urb1Q571H0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.22■□□□□ 0.83
Urb1Q571H0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Urb1Q571H0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Urb1Q571H0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Urb1Q571H0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Urb1Q571H0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.2■□□□□ 0.82
Urb1Q571H0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Urb1Q571H0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Urb1Q571H0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Urb1Q571H0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Urb1Q571H0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Urb1Q571H0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Urb1Q571H0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Urb1Q571H0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.19■□□□□ 0.82
Urb1Q571H0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.19■□□□□ 0.82
Urb1Q571H0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Urb1Q571H0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Urb1Q571H0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.18■□□□□ 0.82
Urb1Q571H0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Urb1Q571H0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Urb1Q571H0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Urb1Q571H0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.17■□□□□ 0.82
Urb1Q571H0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Urb1Q571H0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Urb1Q571H0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Urb1Q571H0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Urb1Q571H0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Urb1Q571H0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Urb1Q571H0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Urb1Q571H0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Urb1Q571H0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Urb1Q571H0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.15■□□□□ 0.82
Urb1Q571H0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Urb1Q571H0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Urb1Q571H0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Urb1Q571H0 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.15■□□□□ 0.82
Urb1Q571H0 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.15■□□□□ 0.82
Urb1Q571H0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Urb1Q571H0 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.14■□□□□ 0.82
Urb1Q571H0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Urb1Q571H0 Gm12922-201ENSMUST00000120626 809 ntBASIC20.14■□□□□ 0.81
Urb1Q571H0 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.14■□□□□ 0.81
Urb1Q571H0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Urb1Q571H0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Urb1Q571H0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.14■□□□□ 0.81
Urb1Q571H0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Urb1Q571H0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Urb1Q571H0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.13■□□□□ 0.81
Urb1Q571H0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.13■□□□□ 0.81
Urb1Q571H0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.13■□□□□ 0.81
Urb1Q571H0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.12■□□□□ 0.81
Urb1Q571H0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Urb1Q571H0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Urb1Q571H0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.12■□□□□ 0.81
Urb1Q571H0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
Urb1Q571H0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Urb1Q571H0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Urb1Q571H0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Urb1Q571H0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Urb1Q571H0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Urb1Q571H0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.11■□□□□ 0.81
Urb1Q571H0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Urb1Q571H0 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.1■□□□□ 0.81
Urb1Q571H0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.1■□□□□ 0.81
Urb1Q571H0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Urb1Q571H0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.1■□□□□ 0.81
Urb1Q571H0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.1■□□□□ 0.81
Urb1Q571H0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Urb1Q571H0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.09■□□□□ 0.81
Urb1Q571H0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Urb1Q571H0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Urb1Q571H0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Urb1Q571H0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Urb1Q571H0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms