Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.68■■□□□ 1.7
Ddx49Q4FZF3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx49Q4FZF3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx49Q4FZF3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.67■■□□□ 1.7
Ddx49Q4FZF3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Ddx49Q4FZF3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx49Q4FZF3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ddx49Q4FZF3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.66■■□□□ 1.7
Ddx49Q4FZF3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ddx49Q4FZF3 Gm7199-201ENSMUST00000118327 1485 ntBASIC25.66■■□□□ 1.7
Ddx49Q4FZF3 Gm7417-201ENSMUST00000192950 473 ntBASIC25.65■■□□□ 1.7
Ddx49Q4FZF3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ddx49Q4FZF3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ddx49Q4FZF3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Ddx49Q4FZF3 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.64■■□□□ 1.7
Ddx49Q4FZF3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx49Q4FZF3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx49Q4FZF3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.63■■□□□ 1.69
Ddx49Q4FZF3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.63■■□□□ 1.69
Ddx49Q4FZF3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx49Q4FZF3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx49Q4FZF3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx49Q4FZF3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.62■■□□□ 1.69
Ddx49Q4FZF3 Gm13241-201ENSMUST00000094493 780 ntBASIC25.62■■□□□ 1.69
Ddx49Q4FZF3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ddx49Q4FZF3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.61■■□□□ 1.69
Ddx49Q4FZF3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.61■■□□□ 1.69
Ddx49Q4FZF3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ddx49Q4FZF3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ddx49Q4FZF3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Ddx49Q4FZF3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ddx49Q4FZF3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx49Q4FZF3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx49Q4FZF3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx49Q4FZF3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx49Q4FZF3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.58■■□□□ 1.69
Ddx49Q4FZF3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx49Q4FZF3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx49Q4FZF3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Ddx49Q4FZF3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx49Q4FZF3 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.57■■□□□ 1.68
Ddx49Q4FZF3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx49Q4FZF3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx49Q4FZF3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx49Q4FZF3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx49Q4FZF3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx49Q4FZF3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx49Q4FZF3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ddx49Q4FZF3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ddx49Q4FZF3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.56■■□□□ 1.68
Ddx49Q4FZF3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ddx49Q4FZF3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.56■■□□□ 1.68
Ddx49Q4FZF3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx49Q4FZF3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx49Q4FZF3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.55■■□□□ 1.68
Ddx49Q4FZF3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.55■■□□□ 1.68
Ddx49Q4FZF3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.55■■□□□ 1.68
Ddx49Q4FZF3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.55■■□□□ 1.68
Ddx49Q4FZF3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx49Q4FZF3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx49Q4FZF3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx49Q4FZF3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ddx49Q4FZF3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.53■■□□□ 1.68
Ddx49Q4FZF3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.53■■□□□ 1.68
Ddx49Q4FZF3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ddx49Q4FZF3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Ddx49Q4FZF3 Gm21956-201ENSMUST00000179946 522 ntBASIC25.52■■□□□ 1.68
Ddx49Q4FZF3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx49Q4FZF3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Ddx49Q4FZF3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx49Q4FZF3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx49Q4FZF3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Ddx49Q4FZF3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.51■■□□□ 1.67
Ddx49Q4FZF3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx49Q4FZF3 Gm9847-201ENSMUST00000052528 599 ntBASIC25.51■■□□□ 1.67
Ddx49Q4FZF3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx49Q4FZF3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx49Q4FZF3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx49Q4FZF3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ddx49Q4FZF3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ddx49Q4FZF3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Ddx49Q4FZF3 Serp2-204ENSMUST00000228055 705 ntBASIC25.5■■□□□ 1.67
Ddx49Q4FZF3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx49Q4FZF3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx49Q4FZF3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.49■■□□□ 1.67
Ddx49Q4FZF3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Ddx49Q4FZF3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx49Q4FZF3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx49Q4FZF3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx49Q4FZF3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx49Q4FZF3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.48■■□□□ 1.67
Ddx49Q4FZF3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx49Q4FZF3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx49Q4FZF3 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.47■■□□□ 1.67
Ddx49Q4FZF3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.47■■□□□ 1.67
Ddx49Q4FZF3 Gm22238-201ENSMUST00000175222 88 ntBASIC25.47■■□□□ 1.67
Ddx49Q4FZF3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.47■■□□□ 1.67
Ddx49Q4FZF3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx49Q4FZF3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx49Q4FZF3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms