Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1brtQ3UNC9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1brtQ3UNC9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks1brtQ3UNC9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cks1brtQ3UNC9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cks1brtQ3UNC9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cks1brtQ3UNC9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cks1brtQ3UNC9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks1brtQ3UNC9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cks1brtQ3UNC9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1brtQ3UNC9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Cks1brtQ3UNC9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1brtQ3UNC9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1brtQ3UNC9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1brtQ3UNC9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1brtQ3UNC9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1brtQ3UNC9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1brtQ3UNC9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Cks1brtQ3UNC9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cks1brtQ3UNC9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks1brtQ3UNC9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks1brtQ3UNC9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.86■□□□□ 0.13
Cks1brtQ3UNC9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks1brtQ3UNC9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks1brtQ3UNC9 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1brtQ3UNC9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1brtQ3UNC9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1brtQ3UNC9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cks1brtQ3UNC9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1brtQ3UNC9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1brtQ3UNC9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.83■□□□□ 0.13
Cks1brtQ3UNC9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.83■□□□□ 0.13
Cks1brtQ3UNC9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cks1brtQ3UNC9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1brtQ3UNC9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1brtQ3UNC9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1brtQ3UNC9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1brtQ3UNC9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1brtQ3UNC9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1brtQ3UNC9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1brtQ3UNC9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1brtQ3UNC9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1brtQ3UNC9 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.82■□□□□ 0.12
Cks1brtQ3UNC9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1brtQ3UNC9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1brtQ3UNC9 Notumos-201ENSMUST00000151998 2659 ntBASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cks1brtQ3UNC9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1brtQ3UNC9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.8■□□□□ 0.12
Cks1brtQ3UNC9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1brtQ3UNC9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cks1brtQ3UNC9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1brtQ3UNC9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cks1brtQ3UNC9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1brtQ3UNC9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cks1brtQ3UNC9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Cks1brtQ3UNC9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Cks1brtQ3UNC9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1brtQ3UNC9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1brtQ3UNC9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1brtQ3UNC9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1brtQ3UNC9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1brtQ3UNC9 Particl-201ENSMUST00000205370 1560 ntBASIC15.79■□□□□ 0.12
Cks1brtQ3UNC9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 196.3 ms