Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.69■□□□□ 0.9
Tnrc6aQ3UHK8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc6aQ3UHK8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc6aQ3UHK8 Gm10232-201ENSMUST00000089221 720 ntBASIC20.67■□□□□ 0.9
Tnrc6aQ3UHK8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc6aQ3UHK8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc6aQ3UHK8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc6aQ3UHK8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.66■□□□□ 0.9
Tnrc6aQ3UHK8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.66■□□□□ 0.9
Tnrc6aQ3UHK8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.66■□□□□ 0.9
Tnrc6aQ3UHK8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnrc6aQ3UHK8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc6aQ3UHK8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc6aQ3UHK8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6aQ3UHK8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6aQ3UHK8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6aQ3UHK8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnrc6aQ3UHK8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.61■□□□□ 0.89
Tnrc6aQ3UHK8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6aQ3UHK8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnrc6aQ3UHK8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tnrc6aQ3UHK8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnrc6aQ3UHK8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnrc6aQ3UHK8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnrc6aQ3UHK8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.58■□□□□ 0.88
Tnrc6aQ3UHK8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Tnrc6aQ3UHK8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.56■□□□□ 0.88
Tnrc6aQ3UHK8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc6aQ3UHK8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc6aQ3UHK8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc6aQ3UHK8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tnrc6aQ3UHK8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc6aQ3UHK8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnrc6aQ3UHK8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.52■□□□□ 0.88
Tnrc6aQ3UHK8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnrc6aQ3UHK8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnrc6aQ3UHK8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnrc6aQ3UHK8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.52■□□□□ 0.87
Tnrc6aQ3UHK8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms